In "https://mran.microsoft.com/snapshot/2015-02-27/web/packages/tcR/vignettes/tcrvignette.pdf"
"In our analysis only few columns are broadly used. Hence, to do almost all analysis you just need a dataframes with following columns:-Read.count-CDR3.amino.acid.sequence-V.segmentsAdditionally, for analysis of J-segments usage or nucleotide sequences intersection (see Subsection3.1) you should provide:-J.segments-CDR3.nucleotide.sequence Any data frame with this columns is suitable for processing with the package..."
but I am getting this error (below) with a dataset containing: read.count, Percentage,CDR3.nucleotide.sequence,CDR3.amino.acid.sequence,V.segments,D.segments,J.segments
Error in $<-.data.frame(*tmp*, "Total.insertions", value = numeric(0)) :
replacement has 0 rows, data has 40
In "https://mran.microsoft.com/snapshot/2015-02-27/web/packages/tcR/vignettes/tcrvignette.pdf" "In our analysis only few columns are broadly used. Hence, to do almost all analysis you just need a dataframes with following columns:-Read.count-CDR3.amino.acid.sequence-V.segmentsAdditionally, for analysis of J-segments usage or nucleotide sequences intersection (see Subsection3.1) you should provide:-J.segments-CDR3.nucleotide.sequence Any data frame with this columns is suitable for processing with the package..."
but I am getting this error (below) with a dataset containing: read.count, Percentage,CDR3.nucleotide.sequence,CDR3.amino.acid.sequence,V.segments,D.segments,J.segments
Error in
$<-.data.frame
(*tmp*
, "Total.insertions", value = numeric(0)) : replacement has 0 rows, data has 40How to fix it?