Performance of JSD is inconsistent with the raw data(original) verses randomised data

imminfo / tcr

[DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.

https://immunarch.com/

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Performance of JSD is inconsistent with the raw data(original) verses randomised data #64

Closed vani10 closed 8 years ago

vani10 commented 8 years ago

Hi Vadim, I performed the JSD by shuffling the frequency count and read count values of my data set and found a similar result. Can you please clarify the behavior of JSD algorithm in this prospect

Thanks

vadimnazarov commented 8 years ago

We are communicating by emails now, but it seems that it's not a bug.