Gibbs sampler broken - Githubissues

imminfo / tcr

[DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.

https://immunarch.com/

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Gibbs sampler broken #80

Closed wyattmcdonnell closed 5 years ago

wyattmcdonnell commented 7 years ago

Using latest stable version of tcR via devtools. Workflow as follows:

Used get.kmers to store kmers from dataframe in a new variable, set meat as T.
Ran command: newvariable <- gibbs.sampler(get.kmers.dataframe, .k = 5, .niter = 500)

Errors as follows:

Error in gzfile(file, "wb") : cannot open connection
In addition: Warning message:
In gzfile(file, "wb") :
cannot open compressed file 'gibbs.500Wed Sep 21 10:11:07 2016.rda', probable reason 'Invalid argument'