pati-ni
commented
1 year ago Hi @hanguojun007 ,
does installing from CRAN install.packages("harmony") or from github devtools::install_github("immunogenomics/harmony") work?
@ilyakorsunsky are we the maintainers of the bioconda package?
i want to use conda to install this packaage, but it failed. Results like that:
Collecting package metadata (current_repodata.json): done Solving environment: unsuccessful initial attempt using frozen solve. Retrying with flexible solve. Solving environment: unsuccessful attempt using repodata from current_repodata.json, retrying with next repodata source. Collecting package metadata (repodata.json): done Solving environment: unsuccessful initial attempt using frozen solve. Retrying with flexible solve. Solving environment: \ Found conflicts! Looking for incompatible packages. This can take several minutes. Press CTRL-C to abort. failed
UnsatisfiableError: The following specifications were found to be incompatible with each other:
Output in format: Requested package -> Available versions
Package _libgcc_mutex conflicts for: r-harmony -> libgcc-ng[version='>=12'] -> _libgcc_mutex[version='|0.1',build='conda_forge|main|main'] python=3.12 -> libgcc-ng[version='>=12'] -> _libgcc_mutex[version='|0.1',build='conda_forge|main|main']
Package libzlib conflicts for: python=3.12 -> zlib[version='>=1.2.13,<1.3.0a0'] -> libzlib==1.2.13=hd590300_5 python=3.12 -> libzlib[version='>=1.2.13,<1.3.0a0']
Package libgcc-ng conflicts for: python=3.12 -> bzip2[version='>=1.0.8,<2.0a0'] -> libgcc-ng[version='>=7.3.0|>=9.3.0|>=9.4.0|>=7.5.0'] python=3.12 -> libgcc-ng[version='>=11.2.0|>=12']
Package zlib conflicts for: python=3.12 -> sqlite[version='>=3.41.2,<4.0a0'] -> zlib[version='>=1.2.12,<1.3.0a0|>=1.2.13,<2.0a0'] python=3.12 -> zlib[version='>=1.2.13,<1.3.0a0']The following specifications were found to be incompatible with your system:
Your installed version is: 2.35