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harmony
Fast, sensitive and accurate integration of single-cell data with Harmony
https://portals.broadinstitute.org/harmony/
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Harmony v1.2
#218
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pati-ni
closed
1 year ago
pati-ni
commented
1 year ago
Major performance enhancements, using indexes for the regression
update_R - Generate blocks correctly #214
lambda optimization - Lambda as a function of E.
New alpha parameter to estimate lambda during runtime
fail-safe for < 40 cells dataset . Setting block_size=0.2. Refuse to run with < 6 cells.
added progress bar for the integration step.