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immunogenomics / starCAT

Implements *CellAnnotator (aka *CAT/starCAT), annotating scRNA-Seq with predefined gene expression programs
MIT License
18 stars 3 forks source link

Vignettes #2

Closed Biomiha closed 6 months ago

Biomiha commented 6 months ago

Hi,

I've tried to find either the python or the R vignettes but both links seem to be broken. Would you be able to share again please? Looking forward to trying the tool. Thank you in advance.

dylkot commented 6 months ago

Hi @Biomiha, hmm I'm not seeing broken links on my end. Do either of these work for you?

https://github.com/immunogenomics/starCAT/blob/main/Examples/starCAT_vignette.ipynb

https://github.com/immunogenomics/starCAT/blob/main/Examples/starCAT_vignette_R.ipynb

Thanks, Dylan

Biomiha commented 6 months ago

Hi @dylkot,

Yes, thank you very much. These both work fine for me. I was referring to the links on the main page (python and R) where I get 404 - page not found errors for both.

Many thanks again. Miha

dylkot commented 6 months ago

Gotcha, I don't fully understand what was going wrong with the links but I fixed them now. Thank you!