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immunogenomics / symphony

Efficient and precise single-cell reference atlas mapping with Symphony
GNU General Public License v3.0
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Does symphony provide corrected PCs like Harmony? #18

Closed albert-ying closed 2 years ago

albert-ying commented 2 years ago

Hi, thank you for the great tool. In Harmony, I can extract the corrected PC values. I'm wondering if there is a way to extract the corrected PC values of query data after mapQuery?

albert-ying commented 2 years ago

Oh, I found it in query$Z slot. I'm closing this issue, but please let me know if I'm wrong 😅

joycekang commented 2 years ago

That is correct!