immunogenomics / symphony

Efficient and precise single-cell reference atlas mapping with Symphony
GNU General Public License v3.0
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I can not find "exprs_norm_all.rds" and "meta_data_subtypes.csv" from data folder? #21

Closed holiday01 closed 2 years ago

holiday01 commented 2 years ago

image Please tell me where I can find those data>

joycekang commented 2 years ago

Apologies - we ended up moving them here: https://github.com/immunogenomics/symphony_reproducibility/tree/main/data/Fig2_pbmcs

This is because the file sizes were too big for the current repo which isn't set up for LFS.

holiday01 commented 2 years ago

Thank you. A new issue is that the R imported "symphony" package, but the "singlecellmethods" package did not exist.

joycekang commented 2 years ago

Try:

library(devtools) install_github('immunogenomics/singlecellmethods') library(singlecellmethods)