Error failed to load with libraryDataGet

amarinderthind commented 2 years ago

Hi Author, I am getting the following error with the function libraryDataGet

snapshotDate(): 2022-04-26 snapshotDate(): 2022-04-26 see ?FlowSorted.Blood.EPIC and browseVignettes('FlowSorted.Blood.EPIC') for documentation loading from cache Error: failed to load resource name: EH1136 title: FlowSorted.Blood.EPIC: Illumina Human Methylation data from EPIC on immunomagnetic sorted adult blood cell populations reason: error in evaluating the argument 'x' in selecting a method for function 'get': empty (zero-byte) input file

lucassalas commented 2 years ago

Could you please send me the session info and the full code?

Do you have access to internet ?

Thank you,

Lucas A Salas

On Aug 4, 2022, at 9:54 PM, Amarinder @.***> wrote:

Hi Author, I am getting the following error with the function libraryDataGet

snapshotDate(): 2022-04-26 snapshotDate(): 2022-04-26 see ?FlowSorted.Blood.EPIC and browseVignettes('FlowSorted.Blood.EPIC') for documentation loading from cache Error: failed to load resource name: EH1136 title: FlowSorted.Blood.EPIC: Illumina Human Methylation data from EPIC on immunomagnetic sorted adult blood cell populations reason: error in evaluating the argument 'x' in selecting a method for function 'get': empty (zero-byte) input file

— Reply to this email directly, view it on GitHubhttps://nam12.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fimmunomethylomics%2FFlowSorted.Blood.EPIC%2Fissues%2F9&data=05%7C01%7CLucas.A.Salas%40dartmouth.edu%7Cc756dfdce2ea4945fb5608da76857f3f%7C995b093648d640e5a31ebf689ec9446f%7C0%7C0%7C637952612984238255%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=JajmUWQJY%2FFUOG118Zron2lUnV7tQrN1ZDkj5s%2BqOwY%3D&reserved=0, or unsubscribehttps://nam12.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fnotifications%2Funsubscribe-auth%2FAFPMGOSA2C56RDTSVRZQNE3VXRX67ANCNFSM55UPJRQQ&data=05%7C01%7CLucas.A.Salas%40dartmouth.edu%7Cc756dfdce2ea4945fb5608da76857f3f%7C995b093648d640e5a31ebf689ec9446f%7C0%7C0%7C637952612984238255%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=QJ4ZoSYRcVqKbdC1GxKaQ6luAdo5mYzhRzUgb5rYre4%3D&reserved=0. You are receiving this because you are subscribed to this thread.Message ID: @.***>

amarinderthind commented 2 years ago

The Internet is working fine on a Linux machine...

library(FlowSorted.Blood.EPIC) ##sucessful

Both of the following commands are giving the same error (executed independently)

FlowSorted.Blood.EPIC <- libraryDataGet("FlowSorted.Blood.EPIC") cellCounts <- estimateCellCounts2(rgSet, referencePlatform ="IlluminaHumanMethylationEPIC")

sessionInfo(package = 'FlowSorted.Blood.EPIC' ) R version 4.2.0 (2022-04-22) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 18.04.6 LTS

Matrix products: default BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.7.1 LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.7.1

locale: [1] LC_CTYPE=en_AU.UTF-8 LC_NUMERIC=C LC_TIME=en_AU.UTF-8 LC_COLLATE=en_AU.UTF-8
[5] LC_MONETARY=en_AU.UTF-8 LC_MESSAGES=en_AU.UTF-8 LC_PAPER=en_AU.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=en_AU.UTF-8 LC_IDENTIFICATION=C

attached base packages: character(0)

other attached packages: [1] FlowSorted.Blood.EPIC_2.0.0

loaded via a namespace (and not attached): [1] utf8_1.2.2 R.utils_2.12.0
[3] tidyselect_1.1.2 RSQLite_2.2.14
[5] AnnotationDbi_1.58.0 htmlwidgets_1.5.4
[7] grid_4.2.0 BiocParallel_1.30.3
[9] devtools_2.4.4 munsell_0.5.0
[11] codetools_0.2-18 preprocessCore_1.58.0
[13] interp_1.1-3 statmod_1.4.36
[15] miniUI_0.1.1.1 withr_2.5.0
[17] colorspace_2.0-3 Biobase_2.56.0
[19] filelock_1.0.2 IlluminaHumanMethylationEPICanno.ilm10b5.hg38_0.0.1 [21] knitr_1.39 rstudioapi_0.13
[23] stats4_4.2.0 MatrixGenerics_1.8.1
[25] FlowSorted.Blood.450k_1.34.0 GenomeInfoDbData_1.2.8
[27] stats_4.2.0 bit64_4.0.5
[29] rhdf5_2.40.0 vctrs_0.4.1
[31] generics_0.1.2 xfun_0.31
[33] biovizBase_1.44.0 BiocFileCache_2.4.0
[35] R6_2.5.1 GenomeInfoDb_1.32.2
[37] illuminaio_0.38.0 locfit_1.5-9.6
[39] AnnotationFilter_1.20.0 bitops_1.0-7
[41] rhdf5filters_1.8.0 cachem_1.0.6
[43] reshape_0.8.9 DelayedArray_0.22.0
[45] assertthat_0.2.1 promises_1.2.0.1
[47] BiocIO_1.6.0 IlluminaHumanMethylation450kanno.ilmn12.hg19_0.6.1 [49] scales_1.2.0 bsseq_1.32.0
[51] nnet_7.3-17 gtable_0.3.0
[53] processx_3.7.0 ensembldb_2.20.2
[55] rlang_1.0.4 utils_4.2.0
[57] methods_4.2.0 genefilter_1.78.0
[59] splines_4.2.0 rtracklayer_1.56.1
[61] lazyeval_0.2.2 DSS_2.44.0
[63] GEOquery_2.64.2 dichromat_2.0-0.1
[65] checkmate_2.1.0 BiocManager_1.30.18
[67] yaml_2.3.5 GenomicFeatures_1.48.3
[69] backports_1.4.1 httpuv_1.6.5
[71] base_4.2.0 Hmisc_4.7-0
[73] usethis_2.1.6 tools_4.2.0
[75] nor1mix_1.3-0 ggplot2_3.3.6
[77] ellipsis_0.3.2 RColorBrewer_1.1-3
[79] BiocGenerics_0.42.0 siggenes_1.70.0
[81] sessioninfo_1.2.2 Rcpp_1.0.8.3
[83] plyr_1.8.7 base64enc_0.1-3
[85] sparseMatrixStats_1.8.0 progress_1.2.2
[87] zlibbioc_1.42.0 purrr_0.3.4
[89] RCurl_1.98-1.7 ps_1.7.1
[91] prettyunits_1.1.1 IlluminaHumanMethylationEPICmanifest_1.0.0
[93] rpart_4.1.16 openssl_2.0.2
[95] deldir_1.0-6 urlchecker_1.0.1
[97] bumphunter_1.38.0 S4Vectors_0.34.0
[99] SummarizedExperiment_1.26.1 cluster_2.1.3
[101] fs_1.5.2 magrittr_2.0.3
[103] data.table_1.14.2 ProtGenerics_1.28.0
[105] IlluminaHumanMethylationEPICanno.ilm10b4.hg19_0.6.0 matrixStats_0.62.0
[107] pkgload_1.3.0 missMethyl_1.30.0
[109] mime_0.12 hms_1.1.1
[111] xtable_1.8-4 XML_3.99-0.10
[113] jpeg_0.1-9 mclust_5.4.10
[115] IRanges_2.30.0 gridExtra_2.3
[117] compiler_4.2.0 biomaRt_2.52.0
[119] minfi_1.42.0 tibble_3.1.7
[121] crayon_1.5.1 R.oo_1.25.0
[123] htmltools_0.5.2 later_1.3.0
[125] tzdb_0.3.0 Formula_1.2-4
[127] tidyr_1.2.0 DBI_1.1.3
[129] ExperimentHub_2.4.0 dbplyr_2.2.1
[131] MASS_7.3-57 DMRcate_2.10.0
[133] rappdirs_0.3.3 Matrix_1.4-1
[135] readr_2.1.2 permute_0.9-7
[137] cli_3.3.0 quadprog_1.5-8
[139] datasets_4.2.0 grDevices_4.2.0
[141] R.methodsS3_1.8.2 parallel_4.2.0
[143] Gviz_1.40.1 GenomicRanges_1.48.0
[145] pkgconfig_2.0.3 GenomicAlignments_1.32.1
[147] IlluminaHumanMethylation450kmanifest_0.4.0 foreign_0.8-82
[149] xml2_1.3.3 foreach_1.5.2
[151] annotate_1.74.0 rngtools_1.5.2
[153] multtest_2.52.0 beanplot_1.3.1
[155] XVector_0.36.0 doRNG_1.8.2
[157] scrime_1.3.5 graphics_4.2.0
[159] callr_3.7.1 stringr_1.4.0
[161] VariantAnnotation_1.42.1 digest_0.6.29
[163] Biostrings_2.64.0 base64_2.0
[165] htmlTable_2.4.1 edgeR_3.38.1
[167] DelayedMatrixStats_1.18.0 restfulr_0.0.15
[169] curl_4.3.2 shiny_1.7.1
[171] Rsamtools_2.12.0 gtools_3.9.2.2
[173] rjson_0.2.21 lifecycle_1.0.1
[175] nlme_3.1-157 Rhdf5lib_1.18.2
[177] askpass_1.1 limma_3.52.2
[179] BSgenome_1.64.0 fansi_1.0.3
[181] pillar_1.7.0 lattice_0.20-45
[183] pkgbuild_1.3.1 KEGGREST_1.36.2
[185] fastmap_1.1.0 httr_1.4.3
[187] survival_3.2-13 remotes_2.4.2
[189] interactiveDisplayBase_1.34.0 glue_1.6.2
[191] png_0.1-7 iterators_1.0.14
[193] BiocVersion_3.15.2 bit_4.0.4
[195] profvis_0.3.7 stringi_1.7.6
[197] HDF5Array_1.24.1 blob_1.2.3
[199] AnnotationHub_3.4.0 org.Hs.eg.db_3.15.0
[201] latticeExtra_0.6-30 memoise_2.0.1
[203] dplyr_1.0.9

lucassalas commented 2 years ago

@Amarinder

I am trying a similar environment, the same versions of the libraries, and the function is working. Also, the test on Bioconductor is not providing me any errors for this function in the testthat.

I wonder if this is related to the ExperimentHub setup in your machine.

Could you try this?

library(ExperimentHub) tmp<-ExperimentHub()[["EH1136"]]

Does that work for you?

If it is not, could you check the options on ?ExperimentHub related to your cache and proxy?

I believe this could be the problem and not the library. But please let me know.

Best,

Lucas

From: Amarinder @.> Sent: Thursday, August 4, 2022 11:36 PM To: immunomethylomics/FlowSorted.Blood.EPIC @.> Cc: Lucas A. Salas @.>; Comment @.> Subject: Re: [immunomethylomics/FlowSorted.Blood.EPIC] Error failed to load with libraryDataGet (Issue #9)

library(FlowSorted.Blood.EPIC) ##sucessful

Both of the following commands are giving the same error (executed independently)

FlowSorted.Blood.EPIC <- libraryDataGet("FlowSorted.Blood.EPIC") cellCounts <- estimateCellCounts2(rgSet, referencePlatform ="IlluminaHumanMethylationEPIC")

sessionInfo(package = 'FlowSorted.Blood.EPIC' ) R version 4.2.0 (2022-04-22) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 18.04.6 LTS

Matrix products: default BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.7.1 LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.7.1

locale: [1] LC_CTYPE=en_AU.UTF-8 LC_NUMERIC=C LC_TIME=en_AU.UTF-8 LC_COLLATE=en_AU.UTF-8 [5] LC_MONETARY=en_AU.UTF-8 LC_MESSAGES=en_AU.UTF-8 LC_PAPER=en_AU.UTF-8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=en_AU.UTF-8 LC_IDENTIFICATION=C

attached base packages: character(0)

other attached packages: [1] FlowSorted.Blood.EPIC_2.0.0

loaded via a namespace (and not attached): [1] utf8_1.2.2 R.utils_2.12.0 [3] tidyselect_1.1.2 RSQLite_2.2.14 [5] AnnotationDbi_1.58.0 htmlwidgets_1.5.4 [7] grid_4.2.0 BiocParallel_1.30.3 [9] devtools_2.4.4 munsell_0.5.0 [11] codetools_0.2-18 preprocessCore_1.58.0 [13] interp_1.1-3 statmod_1.4.36 [15] miniUI_0.1.1.1 withr_2.5.0 [17] colorspace_2.0-3 Biobase_2.56.0 [19] filelock_1.0.2 IlluminaHumanMethylationEPICanno.ilm10b5.hg38_0.0.1 [21] knitr_1.39 rstudioapi_0.13 [23] stats4_4.2.0 MatrixGenerics_1.8.1 [25] FlowSorted.Blood.450k_1.34.0 GenomeInfoDbData_1.2.8 [27] stats_4.2.0 bit64_4.0.5 [29] rhdf5_2.40.0 vctrs_0.4.1 [31] generics_0.1.2 xfun_0.31 [33] biovizBase_1.44.0 BiocFileCache_2.4.0 [35] R6_2.5.1 GenomeInfoDb_1.32.2 [37] illuminaio_0.38.0 locfit_1.5-9.6 [39] AnnotationFilter_1.20.0 bitops_1.0-7 [41] rhdf5filters_1.8.0 cachem_1.0.6 [43] reshape_0.8.9 DelayedArray_0.22.0 [45] assertthat_0.2.1 promises_1.2.0.1 [47] BiocIO_1.6.0 IlluminaHumanMethylation450kanno.ilmn12.hg19_0.6.1 [49] scales_1.2.0 bsseq_1.32.0 [51] nnet_7.3-17 gtable_0.3.0 [53] processx_3.7.0 ensembldb_2.20.2 [55] rlang_1.0.4 utils_4.2.0 [57] methods_4.2.0 genefilter_1.78.0 [59] splines_4.2.0 rtracklayer_1.56.1 [61] lazyeval_0.2.2 DSS_2.44.0 [63] GEOquery_2.64.2 dichromat_2.0-0.1 [65] checkmate_2.1.0 BiocManager_1.30.18 [67] yaml_2.3.5 GenomicFeatures_1.48.3 [69] backports_1.4.1 httpuv_1.6.5 [71] base_4.2.0 Hmisc_4.7-0 [73] usethis_2.1.6 tools_4.2.0 [75] nor1mix_1.3-0 ggplot2_3.3.6 [77] ellipsis_0.3.2 RColorBrewer_1.1-3 [79] BiocGenerics_0.42.0 siggenes_1.70.0 [81] sessioninfo_1.2.2 Rcpp_1.0.8.3 [83] plyr_1.8.7 base64enc_0.1-3 [85] sparseMatrixStats_1.8.0 progress_1.2.2 [87] zlibbioc_1.42.0 purrr_0.3.4 [89] RCurl_1.98-1.7 ps_1.7.1 [91] prettyunits_1.1.1 IlluminaHumanMethylationEPICmanifest_1.0.0 [93] rpart_4.1.16 openssl_2.0.2 [95] deldir_1.0-6 urlchecker_1.0.1 [97] bumphunter_1.38.0 S4Vectors_0.34.0 [99] SummarizedExperiment_1.26.1 cluster_2.1.3 [101] fs_1.5.2 magrittr_2.0.3 [103] data.table_1.14.2 ProtGenerics_1.28.0 [105] IlluminaHumanMethylationEPICanno.ilm10b4.hg19_0.6.0 matrixStats_0.62.0 [107] pkgload_1.3.0 missMethyl_1.30.0 [109] mime_0.12 hms_1.1.1 [111] xtable_1.8-4 XML_3.99-0.10 [113] jpeg_0.1-9 mclust_5.4.10 [115] IRanges_2.30.0 gridExtra_2.3 [117] compiler_4.2.0 biomaRt_2.52.0 [119] minfi_1.42.0 tibble_3.1.7 [121] crayon_1.5.1 R.oo_1.25.0 [123] htmltools_0.5.2 later_1.3.0 [125] tzdb_0.3.0 Formula_1.2-4 [127] tidyr_1.2.0 DBI_1.1.3 [129] ExperimentHub_2.4.0 dbplyr_2.2.1 [131] MASS_7.3-57 DMRcate_2.10.0 [133] rappdirs_0.3.3 Matrix_1.4-1 [135] readr_2.1.2 permute_0.9-7 [137] cli_3.3.0 quadprog_1.5-8 [139] datasets_4.2.0 grDevices_4.2.0 [141] R.methodsS3_1.8.2 parallel_4.2.0 [143] Gviz_1.40.1 GenomicRanges_1.48.0 [145] pkgconfig_2.0.3 GenomicAlignments_1.32.1 [147] IlluminaHumanMethylation450kmanifest_0.4.0 foreign_0.8-82 [149] xml2_1.3.3 foreach_1.5.2 [151] annotate_1.74.0 rngtools_1.5.2 [153] multtest_2.52.0 beanplot_1.3.1 [155] XVector_0.36.0 doRNG_1.8.2 [157] scrime_1.3.5 graphics_4.2.0 [159] callr_3.7.1 stringr_1.4.0 [161] VariantAnnotation_1.42.1 digest_0.6.29 [163] Biostrings_2.64.0 base64_2.0 [165] htmlTable_2.4.1 edgeR_3.38.1 [167] DelayedMatrixStats_1.18.0 restfulr_0.0.15 [169] curl_4.3.2 shiny_1.7.1 [171] Rsamtools_2.12.0 gtools_3.9.2.2 [173] rjson_0.2.21 lifecycle_1.0.1 [175] nlme_3.1-157 Rhdf5lib_1.18.2 [177] askpass_1.1 limma_3.52.2 [179] BSgenome_1.64.0 fansi_1.0.3 [181] pillar_1.7.0 lattice_0.20-45 [183] pkgbuild_1.3.1 KEGGREST_1.36.2 [185] fastmap_1.1.0 httr_1.4.3 [187] survival_3.2-13 remotes_2.4.2 [189] interactiveDisplayBase_1.34.0 glue_1.6.2 [191] png_0.1-7 iterators_1.0.14 [193] BiocVersion_3.15.2 bit_4.0.4 [195] profvis_0.3.7 stringi_1.7.6 [197] HDF5Array_1.24.1 blob_1.2.3 [199] AnnotationHub_3.4.0 org.Hs.eg.db_3.15.0 [201] latticeExtra_0.6-30 memoise_2.0.1 [203] dplyr_1.0.9

- Reply to this email directly, view it on GitHubhttps://nam12.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fimmunomethylomics%2FFlowSorted.Blood.EPIC%2Fissues%2F9%23issuecomment-1206006157&data=05%7C01%7CLucas.A.Salas%40dartmouth.edu%7Cc5def4697b7945c1a99108da7693aa6e%7C995b093648d640e5a31ebf689ec9446f%7C0%7C0%7C637952673836709971%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=BBa%2BFQgFAAl%2B%2BJTGXIbFGmuoivhgNMgQfUOBM9rpyms%3D&reserved=0, or unsubscribehttps://nam12.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fnotifications%2Funsubscribe-auth%2FAFPMGOULF36A4CO5IEGYHNTVXSD3LANCNFSM55UPJRQQ&data=05%7C01%7CLucas.A.Salas%40dartmouth.edu%7Cc5def4697b7945c1a99108da7693aa6e%7C995b093648d640e5a31ebf689ec9446f%7C0%7C0%7C637952673836709971%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=9GUzO6YrO0VgpeRf5pgABaumkPFFr%2BA2NHjJmh8dB5g%3D&reserved=0. You are receiving this because you commented.Message ID: @.**@.>>

amarinderthind commented 2 years ago

Hi Lucas,

It still does not work for EH1136, following is the output for ExperimentalHub cache and proxy. (When I select EH166 instead of EH1136, it is working.

> ExperimentHub(cache=getExperimentHubOption("CACHE"), proxy=getExperimentHubOption("PROXY")) 
snapshotDate(): 2022-04-26
ExperimentHub with 6315 records
# snapshotDate(): 2022-04-26
# $dataprovider: Eli and Edythe L. Broad Institute of Harvard and MIT, NCBI, Jonathan Griffiths, NA, GEO, The Ta...
# $species: Homo sapiens, Mus musculus, Saccharomyces cerevisiae, human gut metagenome, Rattus norvegicus, Sacch...
# $rdataclass: SummarizedExperiment, ExpressionSet, matrix, character, list, DFrame, RaggedExperiment, data.fram...
# additional mcols(): taxonomyid, genome, description, coordinate_1_based, maintainer, rdatadateadded,
#   preparerclass, tags, rdatapath, sourceurl, sourcetype 
# retrieve records with, e.g., 'object[["EH1"]]'

       title

lucassalas commented 2 years ago

Hi @Amarinder,

It seems like a problem with the Cache option.

Please refer to this vignette https://bioconductor.org/packages/devel/bioc/vignettes/AnnotationHub/inst/doc/TroubleshootingTheCache.html#cannot-retrieve-resource

Use the different options progressively, and use the removeCache as the last option. If the problem persists, we may want to loop in the Bioconductor team that are the developers of ExperimentHub.

Below is a snapshot of what you should be able to retrieve.

Best, Lucas

@.***

Lucas

From: Amarinder @.> Sent: Sunday, August 7, 2022 8:01 PM To: immunomethylomics/FlowSorted.Blood.EPIC @.> Cc: Lucas A. Salas @.>; Comment @.> Subject: Re: [immunomethylomics/FlowSorted.Blood.EPIC] Error failed to load with libraryDataGet (Issue #9)

Hi Lucas,

It still does not work for EH1136, following is the output for ExperimentalHub cache and proxy. (When I select EH166 instead of EH1136, it is working.

ExperimentHub(cache=getExperimentHubOption("CACHE"), proxy=getExperimentHubOption("PROXY")) snapshotDate(): 2022-04-26 ExperimentHub with 6315 records

snapshotDate(): 2022-04-26 $dataprovider: Eli and Edythe L. Broad Institute of Harvard and MIT, NCBI, Jonathan Griffiths, NA, GEO, The Ta... $species: Homo sapiens, Mus musculus, Saccharomyces cerevisiae, human gut metagenome, Rattus norvegicus, Sacch... $rdataclass: SummarizedExperiment, ExpressionSet, matrix, character, list, DFrame, RaggedExperiment, data.fram... additional mcols(): taxonomyid, genome, description, coordinate_1_based, maintainer, rdatadateadded, preparerclass, tags, rdatapath, sourceurl, sourcetype retrieve records with, e.g., 'object[["EH1"]]'

   title

- Reply to this email directly, view it on GitHubhttps://nam12.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fimmunomethylomics%2FFlowSorted.Blood.EPIC%2Fissues%2F9%23issuecomment-1207513114&data=05%7C01%7CLucas.A.Salas%40dartmouth.edu%7Cfd196ea282c24ae5c99508da78d10fe1%7C995b093648d640e5a31ebf689ec9446f%7C0%7C0%7C637955136556939606%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=4NUBD8TGEWtFTgq8N8ldr2qcmd6%2BXR4zo54HFVVaUnI%3D&reserved=0, or unsubscribehttps://nam12.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fnotifications%2Funsubscribe-auth%2FAFPMGORIQ2SJIJQB2JUTSJDVYBE3LANCNFSM55UPJRQQ&data=05%7C01%7CLucas.A.Salas%40dartmouth.edu%7Cfd196ea282c24ae5c99508da78d10fe1%7C995b093648d640e5a31ebf689ec9446f%7C0%7C0%7C637955136556939606%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=hQdwc2PWh3P9fmVrZlniynnkU3t%2BtQ0q5lc0IM4lMhg%3D&reserved=0. You are receiving this because you commented.Message ID: @.**@.>>

immunomethylomics / FlowSorted.Blood.EPIC

Error failed to load with libraryDataGet #9

Both of the following commands are giving the same error (executed independently)

Both of the following commands are giving the same error (executed independently)