immunomind / immunarch

🧬 Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires
https://immunarch.com
Apache License 2.0
312 stars 66 forks source link

filtered_contig_annotations under the data object #412

Open daldawood opened 4 months ago

daldawood commented 4 months ago

Hellooo!

I was successfully able to load the data using immunarch. I am having this issue where the data has an additional object in it, which is the same file used "filtered_contig_annotations". This is an issue because the meta data won't be meaningful. Screenshot 2024-07-23 124357

Also, if I have multiple samples folders, each containing "filtered_contig_annotations", how can they be integrated to see the number of clones in each?

Thank you!!