Hello, I am try to deal to the BCR data of smart-seq3 from TRUST4, and the TRUST4 output contain three files :TRUST4_airr.tsv, TRUST4_annot.fa and TRUST4_report.tsv. Maybe the TRUST4_airr.tsv is correct form for immunarch, but I find the example data for TCR and BCR both only have one chain(beta or high chain), however, my BCR data file contain two chain, so whether need to filter the airr.tsv make it contain one chain BCR data. And Another question is if deal to the high chain, how to do fot the low chain.
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Hello, I am try to deal to the BCR data of smart-seq3 from TRUST4, and the TRUST4 output contain three files :TRUST4_airr.tsv, TRUST4_annot.fa and TRUST4_report.tsv. Maybe the TRUST4_airr.tsv is correct form for immunarch, but I find the example data for TCR and BCR both only have one chain(beta or high chain), however, my BCR data file contain two chain, so whether need to filter the airr.tsv make it contain one chain BCR data. And Another question is if deal to the high chain, how to do fot the low chain.
I look forward to your reply, Thank you!