Closed geeky-programer closed 1 week ago
Genalog is required. You can take a look at what their developers are saying.
@geeky-programer For the requirements, I only can help if you give me more details (system, Python version, errors, etc.).
System: rocky linux 9 Python version : 3.9 I have followed the link below and made the changes accordingly. https://github.com/microsoft/genalog/issues/61 --- (resolves the numpy error) The next issue is the opencv-python package. opencv-python==4.2.0.34
INFO: pip is looking at multiple versions of genalog to determine which version is compatible with other requirements. This could take a while. ERROR: Ignored the following yanked versions: 3.4.11.39, 3.4.17.61, 4.4.0.42, 4.4.0.44, 4.5.4.58, 4.5.5.62, 4.7.0.68 ERROR: Ignored the following versions that require a different python version: 0.23.0 Requires-Python >=3.10; 0.23.0rc0 Requires-Python >=3.10; 0.23.0rc2 Requires-Python >=3.10; 0.23.1 Requires-Python >=3.10; 0.23.2 Requires-Python >=3.10; 0.23.2rc1 Requires-Python >=3.10; 0.25.0rc0 Requires-Python >=3.10; 0.25.0rc1 Requires-Python >=3.10; 2.1.0 Requires-Python >=3.10; 2.1.0rc1 Requires-Python >=3.10; 2.1.1 Requires-Python >=3.10; 2.1.2 Requires-Python >=3.10 ERROR: Could not find a version that satisfies the requirement opencv-python==4.2.0.34 (from genalog) (from versions: 3.4.0.14, 3.4.10.37, 3.4.11.41, 3.4.11.43, 3.4.11.45, 3.4.13.47, 3.4.15.55, 3.4.16.57, 3.4.16.59, 3.4.17.63, 3.4.18.65, 4.3.0.38, 4.4.0.40, 4.4.0.46, 4.5.1.48, 4.5.3.56, 4.5.4.60, 4.5.5.64, 4.6.0.66, 4.7.0.72, 4.8.0.74, 4.8.0.76, 4.8.1.78, 4.9.0.80, 4.10.0.82, 4.10.0.84) ERROR: No matching distribution found for opencv-python==4.2.0.34
The install is not successful with any other versions. The same issue resurfaces when using python 3.10 as well
This is what I have on my side now and it works opencv-python==4.10.0.84 I also update the requirements, could you try again?
Can you also specify the version for the following packages? All these have conflicting requirements. requests tqdm scikit-image pandas
requests==2.31.0 tqdm==4.65.0 scikit-image==0.21.0 pandas==2.2.1
Yes this configuration is working. Thank you very much. The issue is with genalog install. Will need to raise an issue on their repo
For reference the working solution for genalog requirements.txt
biopython==1.76 numpy==1.26.4 python-dotenv==0.11.0 requests==2.31.0 azure-core==1.10.0 azure-common==1.1.26 azure-storage-blob==12.3.1 tqdm==4.65.0 Jinja2==2.11.1 WeasyPrint==51 matplotlib==3.2.1 scikit-image==0.21.0 opencv-python==4.10.0.84 pandas==2.2.1 aiofiles==0.5.0 aiohttp==3.6.2
Thank you! I updated the requirements. If it is all ok on your side, can I close the issue?
Yes, close the issue
Hello, I cannot use requirements .txt to install packages. I have been trying to use your repository to get results on post-correction activities. I am not able to install genalog package because of dependency issues with numpy and opencv-python packages. Is there a work around to use the genalog package ?
Thank you in advance