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inab
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trimal
A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0
https://trimal.readthedocs.io/
GNU General Public License v3.0
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Unable to install new version
#103
webguoi
closed
2 months ago
2
Add release download and windows compilation workflow tests
#102
nicodr97
closed
1 month ago
0
Issue with trimAl on Windows:
#101
NoorulemanAbid
closed
4 months ago
6
Update traffic data
#100
nicodr97
opened
4 months ago
0
v1.5.0 release
#99
nicodr97
closed
4 months ago
0
How to only trim terminal of the alignment with a threshold value of gap
#98
permia
closed
8 months ago
1
Refactor the parsers for better compatibility and memory usage
#97
althonos
closed
8 months ago
1
Implement runtime dispatch of SIMD code
#96
althonos
closed
9 months ago
1
Update traffic data
#95
nicodr97
closed
4 months ago
0
Update traffic data
#94
nicodr97
closed
9 months ago
0
errors of "Segmentation fault (core dumped)"
#93
zhengyanstu
closed
9 months ago
2
Update traffic data (30-11-2023)
#92
nicodr97
closed
11 months ago
0
Update traffic data ()
#91
nicodr97
closed
11 months ago
0
Schedule traffic workflow
#90
nicodr97
closed
11 months ago
0
Update traffic data (23-11-2023)
#89
nicodr97
closed
11 months ago
0
Update traffic data (23-11-2023)
#88
github-actions[bot]
closed
11 months ago
0
Updated traffic views (2023-11-17)
#87
github-actions[bot]
closed
11 months ago
0
Updated traffic views ()
#86
github-actions[bot]
closed
11 months ago
0
Updated traffic views $(date +'%d-%m-%Y')
#85
github-actions[bot]
closed
11 months ago
0
Updated traffic views $(date +'%d-%m-%Y')
#84
github-actions[bot]
closed
11 months ago
0
Error: the symbol 'Z' accesing the matrix is not defined in this object
#83
Dylan-Padilla
closed
1 year ago
2
Cutting header name to 10 letters/symbols
#82
samandmac
closed
1 year ago
2
Removing short sequences
#81
theo-allnutt-bioinformatics
closed
1 year ago
2
Add trimmed MSAs and test them as part of the CI (version 2)
#80
nicodr97
closed
1 year ago
0
Change identity matrix to array and reuse it to save memory
#79
nicodr97
closed
1 year ago
0
Add trimmed MSAs and test them as part of the CI
#78
nicodr97
closed
1 year ago
0
Specifying an alternative similarity matrix
#77
JonathonMifsud
closed
1 year ago
2
WARNING 010
#76
WRran-Hydrogen
closed
9 months ago
4
Add SIMD implementation of the different statistics
#75
althonos
closed
1 year ago
5
Error message on alignment when using TrimAl
#74
sakuragi0109
closed
9 months ago
1
Improve performance of sequence length computation
#73
althonos
closed
1 year ago
0
Move identity and overlap computation into dedicated `statistics` classes
#72
althonos
closed
1 year ago
1
WARNING: Removing column '743' composed only by gaps
#71
MaxBai0123
closed
9 months ago
1
Error: the symbol '*' is incorrect
#70
Wuhl00
closed
9 months ago
4
Implement SIMD code for faster statistics computation
#69
althonos
closed
1 year ago
0
Use GitHub Actions as CI for Linux x86_64 and aarch64
#68
markjens
closed
1 year ago
7
[Question] Is Linux/Mac ARM64 officially supported ?
#67
markjens
closed
1 year ago
1
Improve performance of `Similarity::calculateVectors`
#66
althonos
closed
2 years ago
1
Better understand corner case for gappyout
#65
scapella
opened
2 years ago
0
managing/ignoring warnings
#64
scapella
opened
2 years ago
0
Between '-backtrans' and '-nogaps' parameter, Which one to use first?
#63
kishor2019
opened
2 years ago
0
"Permission denied" when installing (MacOS M1 chip)
#62
HeidiOttesen
closed
9 months ago
1
remove columns with gaps in first line?
#61
dstern
closed
9 months ago
1
trimal: command not found
#60
MohammadJamilShuvo
closed
3 years ago
0
Fix print correct input type in readAl
#59
danieledler
opened
3 years ago
1
Removing gappy sequences
#58
BenKuhnhaeuser
closed
4 years ago
1
Option to remove all ambiguous columns
#57
vatanparast
opened
4 years ago
0
trimal -selectcols doesn't work
#56
darap888
closed
9 months ago
6
Does trimal have a codon alignment option ?
#55
BenjaminGuinet
opened
4 years ago
0
'compareset' error when using trimAL 1.2 on Windows
#54
dongzhang0725
closed
4 months ago
5
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