inbo / bird-tracking

🛰🐦 Bird tracking - GPS tracking network for large birds
MIT License
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Movebank download: rename fields and add "same as:" #132

Closed peterdesmet closed 4 years ago

peterdesmet commented 4 years ago

@sarahcd, when downloading data from Movebank (to upload them to Zenodo), I noticed that some fields are not named after the recommended attribute in the Movebank Attribute Dictionary. I listed them below.

Why not always use the recommended attribute name in the download headers? Note, I'm not counting differences between hyphen-notation and non hyphen notation for attribute names (which seem to be used interchangeably).

download file  header in data recommended attribute remark
ref data deploy on date deploy on timestamp mentioned in same as
ref data deploy off date deploy off timestamp mentioned in same as
ref data tag serial no tag serial number   mentioned in same as
gps data bar:barometric height barometric height  mentioned in same as
gps data bar:barometric pressure barometric pressure  mentioned in same as
gps data gps:dop GPS DOP not mentioned in same as or alternative label
gps data gps:satellite count GPS satellite count not mentioned in same as or alternative label
gps data gps:vdop GPS VDOP not mentioned in same as or alternative label
gps data external temperature temperature external not mentioned in same as. It is mentioned as alternative label at http://vocab.nerc.ac.uk/collection/MVB/current/MVB000104/
gps data height above msl height above mean sea level  mentioned in same as
gps data individual taxon canonical name animal taxon mentioned in same as, confusing that it is correctly named animal taxon in ref data
gps data tag local identifier tag ID mentioned in same as, confusing that it is correctly named tag id in ref data
gps data individual local identifier animal ID mentioned in same as, confusing that it is correctly named tag id in ref data
peterdesmet commented 4 years ago

@sarahcd, summary after seeing NERC vocab:

  1. gps:dop, gps:satellite count and gps:vdop should be added as same as in https://www.movebank.org/node/2381 and alternative label at http://vocab.nerc.ac.uk/collection/MVB/current/
  2. external temperature should be updated at https://www.movebank.org/node/2381
  3. It is confusing that the names tag id, animal id and animal taxon are not used in the data export, while they are in the reference data export
peterdesmet commented 4 years ago

And also:

  1. tag serial no (NERC) is named tag serial number at https://www.movebank.org/node/2381. Probably good if it was added as an alternative label?
sarahcd commented 4 years ago

Thanks, I'll look more closely at your recommendations as we plan some updates for term consistency across the API, data downloads and GUI. A few notes:

peterdesmet commented 4 years ago

Hi @sarahcd, hope you're doing well. I'll be closing this issue, as it is something for on Movebank's side. It will remain here for future reference.