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indygreg / PyOxidizer

A modern Python application packaging and distribution tool
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Can't build pyoxidizer on OSX 10.11.6 #242

Open kellyjonbrazil opened 4 years ago

kellyjonbrazil commented 4 years ago

Not sure if I'm barking up the wrong tree here but I was able to build pyoxider on OSX 10.14.6 and compile my python app just fine, but it didn't run on older OSX versions like 10.11.6. So I thought I'd compile on the older version and hopefully it will also work on the newer versions. (is that a correct assumption?)

So I tried to build pyoxidizer on OSX 10.11.6 and it's failing with this message at the end:

$ cargo install pyoxidizer
    Updating crates.io index
  Installing pyoxidizer v0.7.0
   Compiling libc v0.2.69
   Compiling cfg-if v0.1.10
   Compiling autocfg v1.0.0
  <snip>
   Compiling starlark v0.2.0
   Compiling git2 v0.11.0
error: linking with `cc` failed: exit code: 1
  |
  = note: "cc" "-m64" "-L" "/Users/kelly/.rustup/toolchains/stable-x86_64-apple-darwin/lib/rustlib/x86_64-apple-darwin/lib" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629.pyoxidizer.9k6ly61u-cgu.0.rcgu.o" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629.pyoxidizer.9k6ly61u-cgu.1.rcgu.o" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629.pyoxidizer.9k6ly61u-cgu.10.rcgu.o" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629.pyoxidizer.9k6ly61u-cgu.11.rcgu.o" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629.pyoxidizer.9k6ly61u-cgu.12.rcgu.o" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629.pyoxidizer.9k6ly61u-cgu.13.rcgu.o" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629.pyoxidizer.9k6ly61u-cgu.14.rcgu.o" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629.pyoxidizer.9k6ly61u-cgu.15.rcgu.o" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629.pyoxidizer.9k6ly61u-cgu.2.rcgu.o" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629.pyoxidizer.9k6ly61u-cgu.3.rcgu.o" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629.pyoxidizer.9k6ly61u-cgu.4.rcgu.o" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629.pyoxidizer.9k6ly61u-cgu.5.rcgu.o" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629.pyoxidizer.9k6ly61u-cgu.6.rcgu.o" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629.pyoxidizer.9k6ly61u-cgu.7.rcgu.o" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629.pyoxidizer.9k6ly61u-cgu.8.rcgu.o" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629.pyoxidizer.9k6ly61u-cgu.9.rcgu.o" "-o" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/pyoxidizer-e15cab762b13f629.2hmexlsy8eeycc5t.rcgu.o" "-Wl,-dead_strip" "-nodefaultlibs" "-L" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps" "-L" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/build/libgit2-sys-c70ab1d7cb32521b/out/build" "-L" "/usr/lib" "-L" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/build/libssh2-sys-d655363933262024/out/build" "-L" "/usr/local/opt/openssl@1.1/lib" "-L" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/build/backtrace-sys-09ee8273efe9b2fa/out" "-L" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/build/bzip2-sys-6449fdeb6a47a804/out/lib" "-L" "/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/build/zstd-sys-dec897d0c367eb9a/out" "-L" "/Users/kelly/.rustup/toolchains/stable-x86_64-apple-darwin/lib/rustlib/x86_64-apple-darwin/lib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libcc-fe04e6acc7bde07b.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libjobserver-b1e5b1fbec73da6d.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libzip-fcb0d7f86770d8f6.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libbzip2-1f9540e147af7ec6.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libbzip2_sys-18f1f632f489860e.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libpodio-f4be18c14db683c4.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libcrc-a3d1605d491ce5a9.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libhex-9a9679aa454747a1.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libreqwest-2f69b32b989678c5.rlib" 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"/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libunicase-897f8e14f4c3dddf.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libmime-fbae89ea3b740f42.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libflate2-da5de0e9f67e7e12.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libminiz_oxide-25f3128ea74225f9.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libadler32-161b482e6597dbf4.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libcrc32fast-f28f699204ee1ade.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libhyper_tls-12d0d0daf6b4138c.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libnative_tls-dd3adb6a0f4ac2a6.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libtempfile-1602b0014a142b7a.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libsecurity_framework-dce93ec1d1dd5044.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libcore_foundation-8738539b333db7d2.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libsecurity_framework_sys-0b644545694ffd6f.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libcore_foundation_sys-0acc9c4bdcd15b3b.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libhyper-0d160b7aead4525e.rlib" 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"/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libcrossbeam_epoch-978e3f18dc16b3db.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libmemoffset-9c9eef679fc872e4.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libtokio_tcp-dd9a3d135ad5bec2.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libtokio_reactor-da631cf9d3609797.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libtokio_sync-b66ade22f10c10a3.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libparking_lot-1f2c5bd6f9eb266e.rlib" "/private/var/folders/9r/mkwct9rn6d11cryvp6hfrf9m0000gn/T/cargo-installfQ0MHC/release/deps/libparking_lot_core-b915df1f43b66f22.rlib" 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"/Users/kelly/.rustup/toolchains/stable-x86_64-apple-darwin/lib/rustlib/x86_64-apple-darwin/lib/liballoc-8baa8dc315a5da10.rlib" "/Users/kelly/.rustup/toolchains/stable-x86_64-apple-darwin/lib/rustlib/x86_64-apple-darwin/lib/librustc_std_workspace_core-aa91dfbfa1d19d0e.rlib" "/Users/kelly/.rustup/toolchains/stable-x86_64-apple-darwin/lib/rustlib/x86_64-apple-darwin/lib/libcore-6d8e604ca9ec56d7.rlib" "/Users/kelly/.rustup/toolchains/stable-x86_64-apple-darwin/lib/rustlib/x86_64-apple-darwin/lib/libcompiler_builtins-5eb0926740e75669.rlib" "-framework" "Security" "-framework" "Security" "-framework" "CoreFoundation" "-liconv" "-framework" "Security" "-framework" "CoreFoundation" "-lz" "-lssl" "-lcrypto" "-lz" "-lSystem" "-lresolv" "-lc" "-lm"
  = note: Undefined symbols for architecture x86_64:
            "_OPENSSL_init_ssl", referenced from:
                std::sync::once::Once::call_once::_$u7b$$u7b$closure$u7d$$u7d$::hafc5d0155c17ecc7 in libopenssl_sys-5e9593770b416792.rlib(openssl_sys-5e9593770b416792.openssl_sys.2p3j44sn-cgu.2.rcgu.o)
                core::ops::function::FnOnce::call_once$u7b$$u7b$vtable.shim$u7d$$u7d$::h818ecf6403468894 in libopenssl_sys-5e9593770b416792.rlib(openssl_sys-5e9593770b416792.openssl_sys.2p3j44sn-cgu.2.rcgu.o)
          ld: symbol(s) not found for architecture x86_64
          clang: error: linker command failed with exit code 1 (use -v to see invocation)

error: aborting due to previous error

I thought this might be due to missing headers from openssl, so I did a brew install openssl and then exported the following env variables to get it to link to the correct headers, but I keep getting the same error.

LDFLAGS=-L/usr/local/opt/openssl@1.1/lib
OPENSSL_LIB_DIR=/usr/local/opt/openssl@1.1/lib
OPENSSL_INCLUDE_DIR=/usr/local/opt/openssl@1.1/include/
C_INCLUDE_PATH=/usr/local/opt/openssl@1.1/include
OPENSSL_ROOT_DIR=/usr/local/opt/openssl@1.1
CFLAGS=-I/usr/local/opt/openssl@1.1/include
DEP_OPENSSL_INCLUDE=/usr/local/opt/openssl@1.1/include

I got these env variables from here: https://github.com/sfackler/rust-openssl/issues/255

Does it look like I'm getting close?

kellyjonbrazil commented 4 years ago

wonder if it has anything to do with https://github.com/alexcrichton/ssh2-rs/issues/176

To summarize:

  • libssh2-sys build adds /usr/lib as a search path for libraries.
  • openssl-sys build adds /usr/local/opt/openssl@1.1/lib as a search path for libraries. It, however, goes after /usr/lib.
  • openssl-sys uses includes from /usr/local/opt/openssl@1.1/include (correct), but when final binary is linked, it is linked against openssl in /usr/lib (incorrect).

I think this is an issue with libssh2-sys build (but could be caused by downstream libraries like, pkg_config).

indygreg commented 4 years ago

Yeah, this is likely an environment variable / path order issue related to finding the appropriate OpenSSL library on your machine. Linking OpenSSL has been a pain on macOS for several years...

This is probably fixable by changing your system environment a bit. We should definitely capture the workaround in the documentation somewhere.

As for binaries not running on macOS 10.11, try invoking pyoxidizer build with MACOSX_DEPLOYMENT_TARGET=10.11 set. I'm not 100% confident this will work. But it might. It might be worth filing an issue for just that binary compatibility issue. I'd really like to figure out the root cause so we can have a better story for producing macOS binaries.

kellyjonbrazil commented 4 years ago

Thanks for the ideas. I tried using MACOSX_DEPLOYMENT_TARGET=10.11 during build and got this when running on osx 10.11:

$ ./jc 
dyld: lazy symbol binding failed: Symbol not found: _getentropy
  Referenced from: /Users/kelly/Desktop/./jc
  Expected in: /usr/lib/libSystem.B.dylib

dyld: Symbol not found: _getentropy
  Referenced from: /Users/kelly/Desktop/./jc
  Expected in: /usr/lib/libSystem.B.dylib

Trace/BPT trap: 5
indygreg commented 3 years ago

Is this still a reproducible issue on the main branch?

bsiegel commented 3 years ago

I'm still experiencing the issue here with 10.15.6, but I haven't started fooling around with environment variables yet.

EDIT: To clarify, the problem seems to be linking libyaml rather than openssl. But the same "symbols not found for architecture x86_64" occurs.

indygreg commented 3 years ago

Which symbols aren't found? The YAML symbols are a completely different type of failure than the e.g. dyld: lazy symbol binding failed: Symbol not found: _getentropy failure above.

bsiegel commented 3 years ago

Apologies, I think I commented before I got to the point I was at when I submitted the new issue, so as you say it's most likely not related.