search

infectious-disease-ontology-extensions / Fork-From-IDOCore

1 stars 0 forks source link

pathogen types #20

Closed PhiBabs935 closed 4 years ago

PhiBabs935 commented 4 years ago

We still need to import to IDO Core terms for fungi, helminth, and protozoa.

johnbeve commented 4 years ago

I've made sure fungi is imported from IDO, but I didn't see helminth and protozoa. I think these terms are captured by other terms imported though, e.g. parasite.

PhiBabs935 commented 4 years ago

Hmm, there is a 'platyhelminths', which IDOSCHISTO imports from NCBITaxon. Although I guess there is a lack of consensus on taxonomy for helminths: https://en.wikipedia.org/wiki/Parasitic_worm#Taxonomy

PhiBabs935 commented 4 years ago

Was fungi added to IDO Core? I didn't see it in the new IDO-COVID-19 so I wasn't sure. After that we can close this issue I think.

johnbeve commented 4 years ago

It should be, but you're right I forgot to include it in the mass owl file. I'll def add it to the ido file

On Mon, Jul 27, 2020 at 2:56 PM Shane Babcock notifications@github.com wrote:

Was fungi added to IDO Core? I didn't see it in the new IDO-COVID-19 so I wasn't sure. After that we can close this issue I think.

— You are receiving this because you commented. Reply to this email directly, view it on GitHub https://github.com/infectious-disease-ontology-extensions/ido-core/issues/20#issuecomment-664605806, or unsubscribe https://github.com/notifications/unsubscribe-auth/AD4ZM24YTZIV7VFU2UIZNIDR5XLVVANCNFSM4PGLX75A .