information-artifact-ontology / IAO

information artifact ontology
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improve curation status coverage #197

Closed mglont closed 6 years ago

mglont commented 7 years ago

The curation status specification consists of an enumeration of possible states including uncurated, requires discussion and ready for release.

We would like to use this term, in conjunction with the has curation status qualifier to describe the curation status of BioModels depositions. Like other public databases in life sciences, our content is versioned through periodic releases, so we would need to differentiate between terms that are ready for release and terms that have already been released.

Thus, it would make sense from our perspective to add a new term 'curated' with two children -- ready for release and 'released', which would also need to be created. The new terms would help represent the curation status state chart more faithfully:

iao_0000078

mcourtot commented 7 years ago

Hi @zhengj2007 - would you mind looking over this request please?

zhengj2007 commented 7 years ago

@mcourtot Thanks for reminding me. Too busy to forget reply this issue.

@mglont Sorry for late reply.

All IAO curation status is instance. So, we cannot create an instance of an instance. Here are the curation statuses IAO defined from 'uncurated' to 'ready for release': uncurated -> metadata incomplete -> metadata complete -> pending final vetting ->ready for release

All except 'uncurated' are considered as curated status.

Here are details of these curation statuses: https://github.com/information-artifact-ontology/IAO/wiki/OntologyMetadata

I think IAO missed 'released' status. I am happy to add it in. Does it fit your needs?

mglont commented 7 years ago

Hi Jie,

Thanks for the feedback, it's very much appreciated! It'd definitely be useful to add 'released'.

zhengj2007 commented 7 years ago

OK. I will add it and let you know when I am done.

zhengj2007 commented 7 years ago

@mglont 'released' status has been added in ontology-metadata.owl. ID is: IAO_0000651.

commit: https://github.com/information-artifact-ontology/IAO/commit/0d1b88573ef1eb91779c6d6634f36323403cb88d