Closed yujanshrestha closed 6 years ago
the Python port should also output:
${input_image_basename}_biasCorrected.nii
orig_biasCorrected.nii
samseg.talairach.lta
these are necessary for downstream processing in FreeSurfer.
the Python port should also output:
${input_image_basename}_biasCorrected.nii(so usuallyorig_biasCorrected.nii). This is the image corrected by the estimated bias field.samseg.talairach.lta. This is the Talairach atlas transformed by the atlas registration transformation matrix.these are necessary for downstream processing in FreeSurfer.