ins-amu / scripts

prepare data for TVB
MIT License
21 stars 12 forks source link

HCP fiber tracking #27

Closed timpx closed 9 years ago

timpx commented 9 years ago

gradient nonlinearities, which are strong in HCP dMRI, must be corrected during the odf estimation. However, I could not find a tool for this in mrtrix 2. Only solution I can see right now: mrtrix 3. That requires major changes to the pipeline. Snif.

timpx commented 9 years ago

ok there is a quick fix: using deterministic tracking instead of probabilistic tracking, then one can actually use the gradient information that is missing in the odf estimation, and have very nice results

timpx commented 9 years ago

Close this for now, see #28 for future improvement