insightsengineering / cards

CDISC Analysis Results Data
https://insightsengineering.github.io/cards/
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add AE example #262

Closed bzkrouse closed 2 months ago

bzkrouse commented 3 months ago

What changes are proposed in this pull request?

Provide more detail here as needed.

Reference GitHub issue associated with pull request. e.g., 'closes #' Resolves #209


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When the branch is ready to be merged:

github-actions[bot] commented 3 months ago

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Code Coverage Summary

Filename                       Stmts    Miss  Cover    Missing
---------------------------  -------  ------  -------  --------------------------
R/apply_fmt_fn.R                  95      24  74.74%   36-43, 109-116, 198-205
R/ard_attributes.R                35       1  97.14%   56
R/ard_categorical.R              342      16  95.32%   233, 393-394, 550-565, 599
R/ard_complex.R                   34       0  100.00%
R/ard_continuous.R               176       4  97.73%   118, 200-201, 299
R/ard_dichotomous.R               80       8  90.00%   62, 150-155, 178
R/ard_hierarchical.R              83       0  100.00%
R/ard_missing.R                   56       0  100.00%
R/ard_stack.R                     84       7  91.67%   107, 186-191
R/ard_total_n.R                    7       0  100.00%
R/as_nested_list.R                41       0  100.00%
R/bind_ard.R                      22       3  86.36%   51-53
R/check_ard_structure.R           39       6  84.62%   31, 55-59
R/default_stat_labels.R           18       0  100.00%
R/eval_capture_conditions.R       18       0  100.00%
R/get_ard_statistics.R            16       1  93.75%   75
R/nest_for_ard.R                  71       1  98.59%   60
R/print_ard_conditions.R          75      66  12.00%   60-176
R/print.R                         72       0  100.00%
R/process_selectors.R            125       1  99.20%   334
R/replace_null_statistic.R        11       0  100.00%
R/round5.R                         1       0  100.00%
R/selectors.R                     14       0  100.00%
R/shift_ard_columns.R             77      13  83.12%   61, 69, 144-147, 150-156
R/shuffle_ard.R                  102       0  100.00%
R/summary_functions.R             25       1  96.00%   59
R/tidy_ard_order.R                25       0  100.00%
R/tidy_as_ard.R                   39      11  71.79%   88-98
R/utils.R                         24       0  100.00%
TOTAL                           1807     163  90.98%

Diff against main

Filename      Stmts    Miss  Cover
----------  -------  ------  --------
TOTAL             0       0  +100.00%

Results for commit: e3184e4fb6063f09d1ebd6ee1ba41e6060077d72

Minimum allowed coverage is 80%

:recycle: This comment has been updated with latest results

github-actions[bot] commented 3 months ago

Unit Tests Summary

  1 files   90 suites   13s :stopwatch:  88 tests  55 :white_check_mark: 33 :zzz: 0 :x: 178 runs  130 :white_check_mark: 48 :zzz: 0 :x:

Results for commit e3184e4f.

:recycle: This comment has been updated with latest results.

ddsjoberg commented 3 months ago

@bzkrouse this is great, thank you for adding!

What do you think about simplifying the AE table to show either the patient-level OR the AE counts? I think the FDA specs separate them, right? image

bzkrouse commented 2 months ago

@bzkrouse this is great, thank you for adding!

What do you think about simplifying the AE table to show either the patient-level OR the AE counts? I think the FDA specs separate them, right? image

@ddsjoberg Made this update, please let me know what you think!