insightsengineering / teal.modules.clinical

Provides teal modules for the standard clinical trials outputs
https://insightsengineering.github.io/teal.modules.clinical/
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Wave 4 - `tm_t_binary_outcome` shinytests #1155

Closed vedhav closed 1 month ago

vedhav commented 2 months ago

Part of #1108

github-actions[bot] commented 2 months ago

Unit Tests Summary

  1 files   41 suites   16m 24s :stopwatch: 383 tests 273 :white_check_mark: 110 :zzz: 0 :x: 765 runs  543 :white_check_mark: 222 :zzz: 0 :x:

Results for commit 91f584fa.

:recycle: This comment has been updated with latest results.

github-actions[bot] commented 2 months ago

Unit Test Performance Difference

Test Suite $Status$ Time on main $±Time$ $±Tests$ $±Skipped$ $±Failures$ $±Errors$
shinytest2-tm_a_gee 👶 $+121.53$ $+48$ $0$ $0$ $0$
shinytest2-tm_g_barchart_simple 👶 $+206.89$ $+73$ $0$ $0$ $0$
shinytest2-tm_g_ci 👶 $+98.42$ $+41$ $0$ $0$ $0$
shinytest2-tm_g_forest_rsp 👶 $+161.79$ $+48$ $0$ $0$ $0$
shinytest2-tm_g_ipp 👶 $+98.78$ $+45$ $0$ $0$ $0$
shinytest2-tm_g_km 👶 $+222.65$ $+80$ $0$ $0$ $0$
shinytest2-tm_t_binary_outcome 👶 $+70.43$ $+38$ $0$ $0$ $0$
Additional test case details | Test Suite | $Status$ | Time on `main` | $±Time$ | Test Case | |:-----|:----:|:----:|:----:|:-----| | shinytest2-tm_a_gee | 👶 | | $+7.38$ | e2e_tm_a_gee_Change_in_arm_var_changes_the_table_and_does_not_throw_validation_errors. | | shinytest2-tm_a_gee | 👶 | | $+6.81$ | e2e_tm_a_gee_Deselection_of_arm_var_throws_validation_error. | | shinytest2-tm_a_gee | 👶 | | $+6.82$ | e2e_tm_a_gee_Deselection_of_conf_level_throws_validation_error. | | shinytest2-tm_a_gee | 👶 | | $+6.70$ | e2e_tm_a_gee_Deselection_of_cor_struct_does_not_throw_validation_error. | | shinytest2-tm_a_gee | 👶 | | $+6.82$ | e2e_tm_a_gee_Deselection_of_id_var_throws_validation_error. | | shinytest2-tm_a_gee | 👶 | | $+6.85$ | e2e_tm_a_gee_Deselection_of_paramcd_throws_validation_error. | | shinytest2-tm_a_gee | 👶 | | $+7.29$ | e2e_tm_a_gee_Deselection_of_visit_var_throws_validation_error. | | shinytest2-tm_a_gee | 👶 | | $+7.12$ | e2e_tm_a_gee_Module_initializes_in_teal_without_errors_and_produces_table_output. | | shinytest2-tm_a_gee | 👶 | | $+7.34$ | e2e_tm_a_gee_Selection_of_conf_level_changes_the_table_and_does_not_throw_validation_errors. | | shinytest2-tm_a_gee | 👶 | | $+6.87$ | e2e_tm_a_gee_Selection_of_conf_level_out_of_0_1_range_throws_validation_error. | | shinytest2-tm_a_gee | 👶 | | $+7.31$ | e2e_tm_a_gee_Selection_of_cor_struct_changes_the_table_and_does_not_throw_validation_errors. | | shinytest2-tm_a_gee | 👶 | | $+7.55$ | e2e_tm_a_gee_Selection_of_cov_var_changes_the_table_and_does_not_throw_validation_errors. | | shinytest2-tm_a_gee | 👶 | | $+7.67$ | e2e_tm_a_gee_Selection_of_id_var_does_not_change_the_table_and_does_not_throw_validation_errors. | | shinytest2-tm_a_gee | 👶 | | $+7.24$ | e2e_tm_a_gee_Selection_of_output_table_changes_the_table_and_doesn_t_throw_validation_error. | | shinytest2-tm_a_gee | 👶 | | $+7.70$ | e2e_tm_a_gee_Selection_of_paramcd_changes_the_table_and_does_not_throw_validation_errors. | | shinytest2-tm_a_gee | 👶 | | $+7.44$ | e2e_tm_a_gee_Selection_of_visit_var_does_not_change_the_table_and_does_not_throw_validation_errors. | | shinytest2-tm_a_gee | 👶 | | $+6.62$ | e2e_tm_a_gee_Starts_with_specified_label_id_var_arm_var_visit_var_paramcd_cov_var_conf_level_and_conf_struct. | | shinytest2-tm_g_barchart_simple | 👶 | | $+8.84$ | e2e_tm_g_barchart_simple_Changing_barlayout_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_barchart_simple | 👶 | | $+8.75$ | e2e_tm_g_barchart_simple_Changing_expand_y_range_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_barchart_simple | 👶 | | $+8.79$ | e2e_tm_g_barchart_simple_Changing_facet_scale_x_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_barchart_simple | 👶 | | $+8.84$ | e2e_tm_g_barchart_simple_Changing_facet_scale_y_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_barchart_simple | 👶 | | $+8.95$ | e2e_tm_g_barchart_simple_Changing_flip_axis_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_barchart_simple | 👶 | | $+9.03$ | e2e_tm_g_barchart_simple_Changing_label_bars_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_barchart_simple | 👶 | | $+11.54$ | e2e_tm_g_barchart_simple_Changing_rotate_bar_labels_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_barchart_simple | 👶 | | $+8.90$ | e2e_tm_g_barchart_simple_Changing_rotate_x_label_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_barchart_simple | 👶 | | $+8.83$ | e2e_tm_g_barchart_simple_Changing_rotate_y_label_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_barchart_simple | 👶 | | $+8.94$ | e2e_tm_g_barchart_simple_Changing_show_n_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_barchart_simple | 👶 | | $+9.12$ | e2e_tm_g_barchart_simple_De_selection_of_fill_dataset_changes_the_element_and_does_not_throw_validation_errors | | shinytest2-tm_g_barchart_simple | 👶 | | $+8.37$ | e2e_tm_g_barchart_simple_De_selection_of_x_facet_dataset_changes_the_element_and_does_not_throw_validation_errors | | shinytest2-tm_g_barchart_simple | 👶 | | $+8.59$ | e2e_tm_g_barchart_simple_De_selection_of_y_facet_dataset_changes_the_element_and_does_not_throw_validation_errors | | shinytest2-tm_g_barchart_simple | 👶 | | $+7.42$ | e2e_tm_g_barchart_simple_Deselection_of_x_throws_validation_error. | | shinytest2-tm_g_barchart_simple | 👶 | | $+8.46$ | e2e_tm_g_barchart_simple_Duplicate_between_x_and_fill_selection_throws_validation_error | | shinytest2-tm_g_barchart_simple | 👶 | | $+9.05$ | e2e_tm_g_barchart_simple_Duplicate_between_x_and_x_facet_selection_throws_validation_error | | shinytest2-tm_g_barchart_simple | 👶 | | $+9.19$ | e2e_tm_g_barchart_simple_Duplicate_between_x_and_y_facet_selection_throws_validation_error | | shinytest2-tm_g_barchart_simple | 👶 | | $+6.90$ | e2e_tm_g_barchart_simple_Module_initializes_in_teal_without_errors_and_produces_output. | | shinytest2-tm_g_barchart_simple | 👶 | | $+10.96$ | e2e_tm_g_barchart_simple_Selection_of_fill_dataset_changes_the_element_and_does_not_throw_validation_errors | | shinytest2-tm_g_barchart_simple | 👶 | | $+8.96$ | e2e_tm_g_barchart_simple_Selection_of_x_changes_the_element_and_does_not_throw_validation_errors | | shinytest2-tm_g_barchart_simple | 👶 | | $+10.39$ | e2e_tm_g_barchart_simple_Selection_of_x_facet_dataset_changes_the_element_and_does_not_throw_validation_errors | | shinytest2-tm_g_barchart_simple | 👶 | | $+10.27$ | e2e_tm_g_barchart_simple_Selection_of_y_facet_dataset_changes_the_element_and_does_not_throw_validation_errors | | shinytest2-tm_g_barchart_simple | 👶 | | $+7.81$ | e2e_tm_g_barchart_simple_Starts_with_specified_label_id_var_arm_var_visit_var_paramcd_cov_var_conf_level_and_conf_struct. | | shinytest2-tm_g_ci | 👶 | | $+6.78$ | e2e_tm_g_ci_Deselecting_AVISIT_filter_value_throws_validation_error. | | shinytest2-tm_g_ci | 👶 | | $+6.79$ | e2e_tm_g_ci_Deselecting_PARAMCD_filter_value_throws_validation_error. | | shinytest2-tm_g_ci | 👶 | | $+7.06$ | e2e_tm_g_ci_Deselecting_color_column_changes_plot_output_and_doesn_t_throw_validation_error. | | shinytest2-tm_g_ci | 👶 | | $+7.03$ | e2e_tm_g_ci_Deselecting_x_var_column_throws_validation_error. | | shinytest2-tm_g_ci | 👶 | | $+6.86$ | e2e_tm_g_ci_Deselecting_y_var_column_throws_validation_error. | | shinytest2-tm_g_ci | 👶 | | $+6.72$ | e2e_tm_g_ci_Module_initializes_with_specified_label_x_var_y_var_ADLB_filters_color_conf_level_and_stat. | | shinytest2-tm_g_ci | 👶 | | $+7.24$ | e2e_tm_g_ci_Selecting_AVISIT_filter_value_doesn_t_throw_validation_errors. | | shinytest2-tm_g_ci | 👶 | | $+7.44$ | e2e_tm_g_ci_Selecting_PARAMCD_filter_value_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_ci | 👶 | | $+7.40$ | e2e_tm_g_ci_Selecting_color_column_changes_plot_output_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_ci | 👶 | | $+7.11$ | e2e_tm_g_ci_Selecting_confidence_interval_value_changes_plot_and_doesn_t_throw_any_errors. | | shinytest2-tm_g_ci | 👶 | | $+7.10$ | e2e_tm_g_ci_Selecting_statistic_to_use_changes_a_plot_and_doesn_t_throw_any_errors. | | shinytest2-tm_g_ci | 👶 | | $+7.27$ | e2e_tm_g_ci_Selecting_x_var_column_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_ci | 👶 | | $+7.45$ | e2e_tm_g_ci_Selecting_y_var_column_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_ci | 👶 | | $+6.18$ | e2e_tm_g_ci_example_ci_module_initializes_in_teal_without_errors_and_produces_plot_output. | | shinytest2-tm_g_forest_rsp | 👶 | | $+9.28$ | e2e_tm_g_forest_rsp_Changing_font_size_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_forest_rsp | 👶 | | $+9.41$ | e2e_tm_g_forest_rsp_Changing_rel_width_forest_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_forest_rsp | 👶 | | $+8.23$ | e2e_tm_g_forest_rsp_Deselecting_arm_var_throws_validation_error. | | shinytest2-tm_g_forest_rsp | 👶 | | $+8.66$ | e2e_tm_g_forest_rsp_Deselecting_conf_level_or_selecting_outside_the_range_of_0_1_throws_validation_error. | | shinytest2-tm_g_forest_rsp | 👶 | | $+8.34$ | e2e_tm_g_forest_rsp_Deselecting_paramcd_throws_validation_error. | | shinytest2-tm_g_forest_rsp | 👶 | | $+7.93$ | e2e_tm_g_forest_rsp_Deselecting_responders_throws_validation_error. | | shinytest2-tm_g_forest_rsp | 👶 | | $+9.45$ | e2e_tm_g_forest_rsp_Deselecting_strata_var_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_forest_rsp | 👶 | | $+8.96$ | e2e_tm_g_forest_rsp_Deselecting_subgroup_var_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_forest_rsp | 👶 | | $+7.41$ | e2e_tm_g_forest_rsp_Module_initializes_in_teal_without_errors_and_produces_plot_output. | | shinytest2-tm_g_forest_rsp | 👶 | | $+8.20$ | e2e_tm_g_forest_rsp_Module_initializes_with_specified_label_arm_var_paramcd_aval_var_responders_subgroup_var_strata_var_conf_level_fixed_symbol_size_rel_width_forest_font_size. | | shinytest2-tm_g_forest_rsp | 👶 | | $+8.27$ | e2e_tm_g_forest_rsp_Selecting_a_non_factors_column_in_subgroup_var_throws_validation_error. | | shinytest2-tm_g_forest_rsp | 👶 | | $+9.66$ | e2e_tm_g_forest_rsp_Selecting_arm_var_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_forest_rsp | 👶 | | $+9.55$ | e2e_tm_g_forest_rsp_Selecting_conf_level_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_forest_rsp | 👶 | | $+10.66$ | e2e_tm_g_forest_rsp_Selecting_paramcd_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_forest_rsp | 👶 | | $+9.26$ | e2e_tm_g_forest_rsp_Selecting_responders_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_forest_rsp | 👶 | | $+9.42$ | e2e_tm_g_forest_rsp_Selecting_strata_var_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_forest_rsp | 👶 | | $+9.77$ | e2e_tm_g_forest_rsp_Selecting_subgroup_var_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_forest_rsp | 👶 | | $+9.31$ | e2e_tm_g_forest_rsp_Unsetting_fixed_symbol_size_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_ipp | 👶 | | $+7.11$ | e2e_tm_g_ipp_Changing_add_avalu_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_ipp | 👶 | | $+7.17$ | e2e_tm_g_ipp_Changing_add_baseline_hline_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_ipp | 👶 | | $+7.56$ | e2e_tm_g_ipp_Changing_separate_by_obs_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_ipp | 👶 | | $+7.09$ | e2e_tm_g_ipp_Changing_suppress_legend_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_ipp | 👶 | | $+6.86$ | e2e_tm_g_ipp_Deselecting_arm_var_column_throws_validation_error. | | shinytest2-tm_g_ipp | 👶 | | $+6.91$ | e2e_tm_g_ipp_Deselecting_aval_var_throws_validation_error. | | shinytest2-tm_g_ipp | 👶 | | $+6.92$ | e2e_tm_g_ipp_Deselecting_paramcd_throws_validation_error. | | shinytest2-tm_g_ipp | 👶 | | $+6.88$ | e2e_tm_g_ipp_Deselecting_visit_var_throws_validation_error. | | shinytest2-tm_g_ipp | 👶 | | $+6.23$ | e2e_tm_g_ipp_Module_initializes_in_teal_without_errors_and_produces_plot_output. | | shinytest2-tm_g_ipp | 👶 | | $+7.26$ | e2e_tm_g_ipp_Selecting_arm_var_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_ipp | 👶 | | $+7.29$ | e2e_tm_g_ipp_Selecting_aval_var_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_ipp | 👶 | | $+7.23$ | e2e_tm_g_ipp_Selecting_paramcd_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_ipp | 👶 | | $+7.24$ | e2e_tm_g_ipp_Selecting_visit_var_changes_plot_and_doesn_t_throw_validation_errors. | | shinytest2-tm_g_ipp | 👶 | | $+7.03$ | e2e_tm_g_ipp_Starts_with_specified_label_parentname_arm_var_paramcd_id_var_visit_var_aval_var_avalu_var_baseline_var_add_baseline_hline_separate_by_obs_suppress_legend_add_avalu. | | shinytest2-tm_g_km | 👶 | | $+8.69$ | e2e_tm_g_km_Changing_arm_var_changes_the_plot_without_errors. | | shinytest2-tm_g_km | 👶 | | $+8.48$ | e2e_tm_g_km_Changing_compare_arms_changes_the_plot_without_errors. | | shinytest2-tm_g_km | 👶 | | $+8.42$ | e2e_tm_g_km_Changing_conf_level_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_km | 👶 | | $+9.54$ | e2e_tm_g_km_Changing_facet_var_changes_the_plot_without_errors. | | shinytest2-tm_g_km | 👶 | | $+8.41$ | e2e_tm_g_km_Changing_font_size_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_km | 👶 | | $+8.82$ | e2e_tm_g_km_Changing_paramcd_changes_the_plot_without_errors. | | shinytest2-tm_g_km | 👶 | | $+8.36$ | e2e_tm_g_km_Changing_pval_method_coxph_changes_the_plot_without_errors. | | shinytest2-tm_g_km | 👶 | | $+8.38$ | e2e_tm_g_km_Changing_rel_height_plot_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_km | 👶 | | $+8.33$ | e2e_tm_g_km_Changing_show_ci_ribbon_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_km | 👶 | | $+8.14$ | e2e_tm_g_km_Changing_show_km_table_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_km | 👶 | | $+8.61$ | e2e_tm_g_km_Changing_strata_var_changes_the_plot_without_errors. | | shinytest2-tm_g_km | 👶 | | $+8.29$ | e2e_tm_g_km_Changing_ties_coxph_changes_the_plot_without_errors. | | shinytest2-tm_g_km | 👶 | | $+8.36$ | e2e_tm_g_km_Changing_xlab_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_km | 👶 | | $+9.06$ | e2e_tm_g_km_Changing_xticks_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_km | 👶 | | $+8.34$ | e2e_tm_g_km_Changing_yval_changes_the_plot_and_does_not_throw_validation_errors. | | shinytest2-tm_g_km | 👶 | | $+8.06$ | e2e_tm_g_km_Deselecting_arm_var_throws_validation_error. | | shinytest2-tm_g_km | 👶 | | $+8.67$ | e2e_tm_g_km_Deselecting_compare_arms_sets_it_to_FALSE. | | shinytest2-tm_g_km | 👶 | | $+7.54$ | e2e_tm_g_km_Deselecting_conf_level_throws_validation_error. | | shinytest2-tm_g_km | 👶 | | $+7.92$ | e2e_tm_g_km_Deselecting_paramcd_throws_validation_error. | | shinytest2-tm_g_km | 👶 | | $+8.25$ | e2e_tm_g_km_Deselecting_pval_method_coxph_gives_no_validation_error. | | shinytest2-tm_g_km | 👶 | | $+8.73$ | e2e_tm_g_km_Deselecting_strata_var_does_not_throw_errors. | | shinytest2-tm_g_km | 👶 | | $+8.27$ | e2e_tm_g_km_Deselecting_ties_coxph_gives_no_validation_error. | | shinytest2-tm_g_km | 👶 | | $+6.99$ | e2e_tm_g_km_Module_initializes_in_teal_without_errors_and_produces_plot_output. | | shinytest2-tm_g_km | 👶 | | $+7.43$ | e2e_tm_g_km_Starts_with_specified_collapsed_additional_plot_settings. | | shinytest2-tm_g_km | 👶 | | $+7.36$ | e2e_tm_g_km_Starts_with_specified_collapsed_comparison_settings. | | shinytest2-tm_g_km | 👶 | | $+7.44$ | e2e_tm_g_km_Starts_with_specified_groups. | | shinytest2-tm_g_km | 👶 | | $+7.74$ | e2e_tm_g_km_Starts_with_specified_paramcd_aval_var_cnsr_var_facet_var_arm_var_compare_arms_strata_var. | | shinytest2-tm_t_binary_outcome | 👶 | | $+6.81$ | e2e_tm_t_binary_outcome_Deselection_of_arm_var_variable_throws_validation_error. | | shinytest2-tm_t_binary_outcome | 👶 | | $+6.95$ | e2e_tm_t_binary_outcome_Deselection_of_paramcd_level_throws_validation_error. | | shinytest2-tm_t_binary_outcome | 👶 | | $+6.93$ | e2e_tm_t_binary_outcome_Deselection_of_responders_throws_validation_error. | | shinytest2-tm_t_binary_outcome | 👶 | | $+7.05$ | e2e_tm_t_binary_outcome_Deselection_of_strata_var_variable_changes_the_table_and_does_not_throw_validation_errors. | | shinytest2-tm_t_binary_outcome | 👶 | | $+6.32$ | e2e_tm_t_binary_outcome_Module_initializes_in_teal_without_errors_and_produces_table_output. | | shinytest2-tm_t_binary_outcome | 👶 | | $+7.23$ | e2e_tm_t_binary_outcome_Selecting_arm_var_variable_changes_the_table_and_does_not_throw_validation_errors. | | shinytest2-tm_t_binary_outcome | 👶 | | $+7.51$ | e2e_tm_t_binary_outcome_Selecting_paramcd_level_changes_the_table_and_does_not_throw_validation_errors. | | shinytest2-tm_t_binary_outcome | 👶 | | $+7.19$ | e2e_tm_t_binary_outcome_Selecting_responders_changes_the_table_and_does_not_throw_validation_errors. | | shinytest2-tm_t_binary_outcome | 👶 | | $+7.10$ | e2e_tm_t_binary_outcome_Selecting_strata_var_variable_changes_the_table_and_does_not_throw_validation_errors. | | shinytest2-tm_t_binary_outcome | 👶 | | $+7.35$ | e2e_tm_t_binary_outcome_Starts_with_specified_label_paramcd_responders_arm_var_buckets_u_diff_ci_u_diff_test_strata_var_s_diff_ci_prop_ci_method_conf_level_aval_var_compare_arms_combine_comp_arms_u_odds_ratio_show_rsp_cat. |

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