I try Step4(run pretrain.ipynb) with numpy (version 1.15 / 1.16 / 1.17 /1.18)
<ver 1.15>
→AttributeError: module 'numpy.core.multiarray' has no attribute 'newbuffer'
<ver 1.16 / 1.17 / 1.18>
→NameError: name '_private' is not defined
Which version do I use?
And please tell me solution.
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _find_andload(name, import)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _find_and_loadunlocked(name, import)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _load_unlocked(spec)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _load_backward_compatible(spec)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/gentrl-0.1-py3.5.egg/gentrl/init.py in
----> 1 from .encoder import RNNEncoder
2 from .decoder import DilConvDecoder
3 from .gentrl import GENTRL
4 from .dataloader import MolecularDataset
5
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _find_andload(name, import)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _find_and_loadunlocked(name, import)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _load_unlocked(spec)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _load_backward_compatible(spec)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/gentrl-0.1-py3.5.egg/gentrl/encoder.py in
----> 1 import torch
2 from torch import nn
3 from gentrl.tokenizer import encode, get_vocab_size
4
5
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/torch-1.0.1-py3.5-macosx-10.9-x86_64.egg/torch/init.py in
40 # or there is risk that later c modules will segfault when importing numpy
41 try:
---> 42 import numpy as _np
43 except ImportError:
44 pass
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/numpy/init.py in
140 return loader(*packages, **options)
141
--> 142 from . import add_newdocs
143 all = ['add_newdocs',
144 'ModuleDeprecationWarning',
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/numpy/add_newdocs.py in
2022 Returned, uninitialized buffer object of size bytes.
2023
-> 2024 """)
2025
2026 add_newdoc('numpy.core.multiarray', 'getbuffer',
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/numpy/core/function_base.py in add_newdoc(place, obj, doc, warn_on_python)
AttributeError: module 'numpy.core.multiarray' has no attribute 'newbuffer'
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _find_andload(name, import)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _find_and_loadunlocked(name, import)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _load_unlocked(spec)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _load_backward_compatible(spec)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/gentrl-0.1-py3.5.egg/gentrl/init.py in
----> 1 from .encoder import RNNEncoder
2 from .decoder import DilConvDecoder
3 from .gentrl import GENTRL
4 from .dataloader import MolecularDataset
5
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _find_andload(name, import)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _find_and_loadunlocked(name, import)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _load_unlocked(spec)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _load_backward_compatible(spec)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/gentrl-0.1-py3.5.egg/gentrl/encoder.py in
----> 1 import torch
2 from torch import nn
3 from gentrl.tokenizer import encode, get_vocab_size
4
5
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/torch-1.0.1-py3.5-macosx-10.9-x86_64.egg/torch/init.py in
40 # or there is risk that later c modules will segfault when importing numpy
41 try:
---> 42 import numpy as _np
43 except ImportError:
44 pass
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/numpy/init.py in
185 # We don't actually use this ourselves anymore, but I'm not 100% sure that
186 # no-one else in the world is using it (though I hope not)
--> 187 from .testing import Tester
188
189 # Pytest testing
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/numpy/testing/init.py in
16 )
17
---> 18 all = _private.utils.all + ['TestCase', 'run_module_suite']
19
20 from numpy._pytesttester import PytestTester
I try Step4(run pretrain.ipynb) with numpy (version 1.15 / 1.16 / 1.17 /1.18) <ver 1.15> →AttributeError: module 'numpy.core.multiarray' has no attribute 'newbuffer' <ver 1.16 / 1.17 / 1.18> →NameError: name '_private' is not defined
Which version do I use? And please tell me solution.
●<envirments> env jupyter notebook python 3.5 scipy 1.4.1 pandas 0.23.4 torch 1.0.1
<error detail( ver 1.15)>
AttributeError Traceback (most recent call last) ~/GENTRL/examples/pretrain.ipynb in
----> 1 import gentrl
2 import torch
3 import pandas as pd
4 torch.cuda.set_device(0)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _find_andload(name, import)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _find_and_loadunlocked(name, import)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _load_unlocked(spec)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _load_backward_compatible(spec)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/gentrl-0.1-py3.5.egg/gentrl/init.py in
----> 1 from .encoder import RNNEncoder
2 from .decoder import DilConvDecoder
3 from .gentrl import GENTRL
4 from .dataloader import MolecularDataset
5
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _find_andload(name, import)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _find_and_loadunlocked(name, import)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _load_unlocked(spec)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _load_backward_compatible(spec)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/gentrl-0.1-py3.5.egg/gentrl/encoder.py in
----> 1 import torch
2 from torch import nn
3 from gentrl.tokenizer import encode, get_vocab_size
4
5
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/torch-1.0.1-py3.5-macosx-10.9-x86_64.egg/torch/init.py in
40 # or there is risk that later c modules will segfault when importing numpy
41 try:
---> 42 import numpy as _np
43 except ImportError:
44 pass
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/numpy/init.py in
140 return loader(*packages, **options)
141
--> 142 from . import add_newdocs
143 all = ['add_newdocs',
144 'ModuleDeprecationWarning',
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/numpy/add_newdocs.py in
2022 Returned, uninitialized buffer object of
size
bytes. 2023 -> 2024 """) 2025 2026 add_newdoc('numpy.core.multiarray', 'getbuffer',~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/numpy/core/function_base.py in add_newdoc(place, obj, doc, warn_on_python)
AttributeError: module 'numpy.core.multiarray' has no attribute 'newbuffer'
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<error detail( ver 1.16 /1.17/ 1.18)>
NameError Traceback (most recent call last) ~/GENTRL/examples/pretrain.ipynb in
----> 1 import gentrl
2 import torch
3 import pandas as pd
4 torch.cuda.set_device(0)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _find_andload(name, import)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _find_and_loadunlocked(name, import)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _load_unlocked(spec)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _load_backward_compatible(spec)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/gentrl-0.1-py3.5.egg/gentrl/init.py in
----> 1 from .encoder import RNNEncoder
2 from .decoder import DilConvDecoder
3 from .gentrl import GENTRL
4 from .dataloader import MolecularDataset
5
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _find_andload(name, import)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _find_and_loadunlocked(name, import)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _load_unlocked(spec)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/importlib/_bootstrap.py in _load_backward_compatible(spec)
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/gentrl-0.1-py3.5.egg/gentrl/encoder.py in
----> 1 import torch
2 from torch import nn
3 from gentrl.tokenizer import encode, get_vocab_size
4
5
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/torch-1.0.1-py3.5-macosx-10.9-x86_64.egg/torch/init.py in
40 # or there is risk that later c modules will segfault when importing numpy
41 try:
---> 42 import numpy as _np
43 except ImportError:
44 pass
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/numpy/init.py in
185 # We don't actually use this ourselves anymore, but I'm not 100% sure that
186 # no-one else in the world is using it (though I hope not)
--> 187 from .testing import Tester
188
189 # Pytest testing
~/opt/anaconda3/envs/xxxxx/lib/python3.5/site-packages/numpy/testing/init.py in
16 )
17
---> 18 all = _private.utils.all + ['TestCase', 'run_module_suite']
19
20 from numpy._pytesttester import PytestTester
NameError: name '_private' is not defined