Closed aksarkar closed 12 months ago
Thanks @aksarkar for posting this issue. Adding a volumes
configuration option to the Docker executor config in redun.ini
sounds like a good idea and should be straightforward to implement. Thanks for the suggestion.
We have now added a volumes
config option to the redun.ini
config file. Thanks for posting this issue.
I am using
redun
to run a workflow manually on a single EC2 instance (via ssh and manual invocation, not Batch) using a Docker container to ensure reproducibility.Currently, I need to specify the volumes to be made available to the container for each task, for example
otherwise, I will get
FileNotFoundError
when trying to read/write from the volume.This does not appear to be configurable in
redun.ini
, since includingvolumes
there and removing it fromredun.task()
does not workIt would be helpful to be able to configure volumes in
redun.ini
.redun version 0.16.1