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insitro
/
redun
Yet another redundant workflow engine
https://insitro.github.io/redun/
Apache License 2.0
510
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43
forks
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Fix a case where job completion wasn't being detected.
#52
dakoner
closed
2 years ago
0
Checks k8s server version, disable array job if server is too old
#51
dakoner
closed
2 years ago
0
Get k8s server version, default to no array jobs if server is too old.
#50
dakoner
closed
2 years ago
0
adding graphviz-dev in Dockerfile to install with apt, and pygraphviz …
#49
annashch-insitro
closed
2 years ago
0
Code packaging for script tasks
#48
spitz-dan-l
opened
2 years ago
0
Pass self.region to submit_command() from AWSBatchExecutor._submit_single_job()
#47
spitz-dan-l
closed
2 years ago
0
Task-specific code packaging
#46
spitz-dan-l
opened
2 years ago
1
Quality of life improvements for kubernetes executor
#45
ricomnl
closed
2 years ago
3
Add creation of namespace; ignore error if it already exists.
#44
dakoner
closed
2 years ago
1
K8s dakoner create namespace
#43
dakoner
closed
2 years ago
0
Memory limits for local executor
#42
jshleap
opened
2 years ago
3
Scheduler becomes a bottleneck when tasks return large python objects
#41
spitz-dan-l
opened
2 years ago
0
Revert 1 k8s improvements
#40
ricomnl
closed
2 years ago
0
Add Docker image as task option
#39
mstone-modulus
closed
2 years ago
9
Bump pyspark from 3.1.1 to 3.1.3
#38
dependabot[bot]
closed
2 years ago
0
working on fixing docs build
#37
mattrasmus
closed
2 years ago
0
Add missing data.tsv and fix cleanup default
#36
mattrasmus
closed
2 years ago
1
Docker executor: No such container
#35
ricomnl
closed
2 years ago
3
Google cloud
#34
jshleap
closed
1 year ago
6
Fixed typos and minor grammatical stuff like missing commas, etc. in the documentation and README.md
#33
ricomnl
closed
2 years ago
0
Update README.md
#32
sammun-insitro
closed
2 years ago
0
redun does not execute any code for a simple example
#31
elanmart
closed
2 years ago
4
Running redun pipelines locally with Docker
#30
ricomnl
closed
2 years ago
7
Conda executor and initial example
#29
spitz-dan-l
closed
1 year ago
1
Simplify set_arg_defaults.
#28
lucaswiman
closed
2 years ago
3
Cleaning up Batch jobs on unexpected termination
#27
spitz-dan-l
opened
2 years ago
1
Integrate genomics libraries in Spark support
#26
heuermh
opened
2 years ago
1
SLURM/HPC executor
#25
multimeric
opened
2 years ago
3
AWS Batch executor enhancements: shared memory requirements, and more faithful local dev experience
#24
spitz-dan-l
closed
2 years ago
7
Hashing a Task to include its dependencies
#23
elanmart
opened
2 years ago
2
Add k8s executor
#22
mattrasmus
closed
1 year ago
5
Tempdir in script
#21
spitz-dan-l
opened
2 years ago
0
For script tasks, `tempdir=True` with remote executor produces an error
#20
spitz-dan-l
opened
2 years ago
2
K8s executor implementation
#19
dakoner
closed
2 years ago
3
Setting up the environment prior to task execution
#18
spitz-dan-l
closed
2 years ago
3
Config option `db_aws_secret_name` only works if the secret is in `us-west-2`
#17
spitz-dan-l
closed
2 years ago
2
Code packaging files in parent directories
#16
spitz-dan-l
opened
2 years ago
2
Custom commandline argument parsing
#15
spitz-dan-l
closed
2 years ago
2
SQLalchemy caching warning
#14
bbremer
closed
2 years ago
3
No need to use editable mode for redun install in examples
#13
mattrasmus
closed
2 years ago
0
Staging files
#12
lyin-vir
closed
2 years ago
2
Fixes for several problems davidek saw
#11
davidekhub
closed
2 years ago
2
Nesting tasks with different executors: confusing results
#10
dakoner
closed
2 years ago
3
Can't stage out directory trees
#9
dakoner
closed
2 years ago
2
Use pathlib.Path instead of strings for path
#8
flying-sheep
opened
2 years ago
0
Use subprocess.run/check_output/… in examples
#7
flying-sheep
closed
2 years ago
1
[TypeError: Expressions of unknown length cannot be iterated] when trying to iterate on task output
#6
lyin-vir
closed
2 years ago
2
Fix typos discovered by codespell
#5
cclauss
closed
2 years ago
0
GitHub Action to run tox on every pull request
#4
cclauss
closed
2 years ago
0
Import Executor for lines 36 and 38
#3
cclauss
closed
2 years ago
0
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