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instadeepai
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nucleotide-transformer
🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics
https://www.biorxiv.org/content/10.1101/2023.01.11.523679v2
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Update README.txt
#30
dallatt
closed
1 year ago
0
28 fix v2 api
#29
dallatt
closed
1 year ago
0
Fix v2 api
#28
dallatt
closed
1 year ago
0
Performance on RNA sequences
#27
vuhongai
closed
8 months ago
1
Tutorial no longer works with the v2 models
#26
davidhbrann
closed
1 year ago
1
hyenadna evaluation
#25
wawpaopao
closed
8 months ago
1
model size mismatch
#24
Azai-yx
closed
1 year ago
2
feat: Add missing modules
#23
dallatt
closed
1 year ago
0
Fix missing module
#22
dallatt
closed
1 year ago
0
ModuleNotFoundError: No module named 'nucleotide_transformer.utils'
#21
nehmea
closed
1 year ago
2
feat: Adapt README to new models
#20
dallatt
closed
1 year ago
0
Adapt README
#19
dallatt
closed
1 year ago
0
17 add nt v2 models
#18
dallatt
closed
1 year ago
1
Add NT v2 models
#17
dallatt
closed
1 year ago
0
2 sequences as input
#16
hhy-joseph
closed
8 months ago
1
Is the test split available?
#15
exnx
closed
8 months ago
0
Huggingface checkpoints
#14
fteufel
closed
1 year ago
3
Pre-training on plant genomes
#13
zhaijj
closed
8 months ago
3
Change default max positions
#12
dallatt
closed
1 year ago
1
Fix default `max_positions` in `get_pretrained_model`
#11
GRichard513
closed
1 year ago
0
9 clarifying context length and readme
#10
dallatt
closed
1 year ago
1
clarifying context length and readme
#9
dallatt
closed
1 year ago
0
docs: fix 's with caron' in name
#8
BioGeek
closed
1 year ago
0
Clarifications about context size
#7
gonzalobenegas
closed
1 year ago
2
Hugging Face Hub
#6
gonzalobenegas
closed
1 year ago
2
Fine-tune codes
#5
ChongWu-Biostat
closed
8 months ago
1
Issues with embedding with 2B5 models
#4
frederikkemarin
closed
1 year ago
5
Fine-tune models availability
#3
luciabarb
closed
8 months ago
1
1 first working version of the code
#2
ranzenTom
closed
1 year ago
0
first working version of the code
#1
ranzenTom
closed
1 year ago
0
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