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intake / intake-esm

An intake plugin for parsing an Earth System Model (ESM) catalog and loading assets into xarray datasets.
https://intake-esm.readthedocs.io
Apache License 2.0
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Implement Intake's new entry_point system #121

Closed jhamman closed 5 years ago

jhamman commented 5 years ago

Description

Intake has recently introduced a new plugin system using entry_points. It seems Intake-esm is yet to implement this system and, as such, intake is throwing warnings (see below) on import.

What I Did

import intake

/srv/conda/envs/notebook/lib/python3.7/site-packages/intake/source/discovery.py:136: FutureWarning: The drivers ['esm_metadatastore'] do not specify entry_points and were only discovered via a package scan. This may break in a future release of intake. The packages should be updated.
  FutureWarning)

conda list

# packages in environment at /srv/conda/envs/notebook: # # Name Version Build Channel _libgcc_mutex 0.1 main defaults absl-py 0.7.1 py37_0 conda-forge adal 1.2.2 py_0 conda-forge affine 2.2.2 py_0 conda-forge aiohttp 3.5.4 py37h14c3975_0 conda-forge alembic 1.0.11 py_0 conda-forge antlr-python-runtime 4.7.2 py37_1000 conda-forge appdirs 1.4.3 py_1 conda-forge asciitree 0.3.3 py_2 conda-forge asn1crypto 0.24.0 py37_1003 conda-forge astor 0.7.1 py_0 conda-forge async-timeout 3.0.1 py_1000 conda-forge async_generator 1.10 py_0 conda-forge attrdict 2.0.1 py_0 conda-forge attrs 19.1.0 py_0 conda-forge backcall 0.1.0 py_0 conda-forge beautifulsoup4 4.8.0 py37_0 conda-forge bleach 3.1.0 py_0 conda-forge blinker 1.4 py_1 conda-forge blosc 1.17.0 he1b5a44_0 conda-forge bokeh 1.3.4 py37_0 conda-forge boost-cpp 1.70.0 h8e57a91_2 conda-forge boto3 1.9.203 py_0 conda-forge botocore 1.12.203 py_0 conda-forge branca 0.3.1 py_0 conda-forge bzip2 1.0.8 h516909a_0 conda-forge c-ares 1.15.0 h516909a_1001 conda-forge ca-certificates 2019.6.16 hecc5488_0 conda-forge cachetools 2.1.0 py_0 conda-forge cairo 1.16.0 hfb77d84_1002 conda-forge cartopy 0.17.0 py37hd759880_1006 conda-forge certifi 2019.6.16 py37_1 conda-forge certipy 0.1.3 py_0 conda-forge cf-units 2.1.3 py37hc1659b7_0 conda-forge cffi 1.12.3 py37h8022711_0 conda-forge cfitsio 3.470 hb60a0a2_1 conda-forge cftime 1.0.3.4 py37hd352d35_1001 conda-forge chardet 3.0.4 py37_1003 conda-forge click 7.0 py_0 conda-forge click-plugins 1.1.1 py_0 conda-forge cligj 0.5.0 py_0 conda-forge climlab 0.7.5 py37h7eb8c7e_0 conda-forge cloudpickle 1.2.1 py_0 conda-forge colorcet 2.0.1 py_0 conda-forge configobj 5.0.6 py_0 conda-forge configurable-http-proxy 4.1.0 node11_1 conda-forge cryptography 2.7 py37h72c5cf5_0 conda-forge curl 7.65.3 hf8cf82a_0 conda-forge cycler 0.10.0 py_1 conda-forge cytoolz 0.10.0 py37h516909a_0 conda-forge dask 2.2.0 py_0 conda-forge dask-core 2.2.0 py_0 conda-forge dask-glm 0.1.0 0 conda-forge dask-kubernetes 0.9.1 py_0 conda-forge dask-labextension 1.0.0 pypi_0 pypi dask-ml 1.0.0 py_0 conda-forge datashader 0.7.0 py_0 conda-forge datashape 0.5.4 py_1 conda-forge dbus 1.13.6 he372182_0 conda-forge decorator 4.4.0 py_0 conda-forge defusedxml 0.5.0 py_1 conda-forge distributed 2.2.0 py_1 conda-forge docopt 0.6.2 py_1 conda-forge docrep 0.2.7 py_0 conda-forge docutils 0.14 py37_1001 conda-forge entrypoints 0.3 py37_1000 conda-forge eofs 1.4.0 py_0 conda-forge esmf 7.1.0 h9a7cb89_1006 conda-forge esmpy 7.1.0 py37h24bf2e0_3 conda-forge expat 2.2.5 he1b5a44_1003 conda-forge fasteners 0.14.1 py_3 conda-forge fiona 1.8.6 py37hf242f0b_3 conda-forge fontconfig 2.13.1 h86ecdb6_1001 conda-forge freetype 2.10.0 he983fc9_0 conda-forge freexl 1.0.5 h14c3975_1002 conda-forge fribidi 1.0.5 h516909a_1002 conda-forge fsspec 0.4.1 py_0 conda-forge future 0.17.1 py37_1000 conda-forge gast 0.2.2 py_0 conda-forge gcsfs 0.3.0 py_0 conda-forge gdal 2.4.1 py37h5f563d9_8 conda-forge geopandas 0.5.1 py_0 conda-forge geos 3.7.2 he1b5a44_1 conda-forge geotiff 1.4.3 hb6868eb_1001 conda-forge geoviews 1.6.2 py_0 conda-forge geoviews-core 1.6.2 py_0 conda-forge gettext 0.19.8.1 hc5be6a0_1002 conda-forge giflib 5.1.7 h516909a_1 conda-forge glib 2.58.3 h6f030ca_1002 conda-forge google-auth 1.6.3 py_0 conda-forge google-auth-oauthlib 0.4.0 py_0 conda-forge graphite2 1.3.13 hf484d3e_1000 conda-forge graphviz 2.40.1 h5933667_1 conda-forge grpcio 1.16.1 py37hf8bcb03_1 defaults gst-plugins-base 1.14.5 h0935bb2_0 conda-forge gstreamer 1.14.5 h36ae1b5_0 conda-forge gsw 3.3.1 py37h516909a_0 conda-forge h5netcdf 0.7.4 py_0 conda-forge h5py 2.9.0 nompi_py37h513d04c_1104 conda-forge harfbuzz 2.4.0 h9f30f68_2 conda-forge hdf4 4.2.13 h9a582f1_1002 conda-forge hdf5 1.10.5 nompi_h3c11f04_1100 conda-forge heapdict 1.0.0 py37_1000 conda-forge holoviews 1.12.1 pypi_0 pypi hvplot 0.4.0 py_1 conda-forge icu 64.2 he1b5a44_0 conda-forge idna 2.8 py37_1000 conda-forge imageio 2.5.0 py37_0 conda-forge intake 0.5.3 py_0 conda-forge intake-esm 2019.8.5 py_0 conda-forge intake-xarray 0.3.1 py_0 conda-forge ipykernel 5.1.2 py37h5ca1d4c_0 conda-forge ipyleaflet 0.11.1 py37_1 conda-forge ipython 7.7.0 py37h5ca1d4c_0 conda-forge ipython_genutils 0.2.0 py_1 conda-forge ipywidgets 7.5.1 py_0 conda-forge iris 2.2.0 py37_1003 conda-forge jedi 0.14.1 py37_0 conda-forge jinja2 2.10.1 py_0 conda-forge jmespath 0.9.4 py_0 conda-forge joblib 0.13.2 py_0 conda-forge jpeg 9c h14c3975_1001 conda-forge json-c 0.13.1 h14c3975_1001 conda-forge json5 0.8.5 py_0 conda-forge jsonschema 3.0.2 py37_0 conda-forge jupyter 1.0.0 py_2 conda-forge jupyter-server-proxy 1.1.0 py_0 conda-forge jupyter_client 5.3.1 py_0 conda-forge jupyter_console 6.0.0 py_0 conda-forge jupyter_core 4.4.0 py_0 conda-forge jupyterhub 1.0.0 py37_0 conda-forge jupyterlab 1.0.4 py37_0 conda-forge jupyterlab_server 1.0.0 py_1 conda-forge kealib 1.4.10 h58c409b_1005 conda-forge keras 2.2.4 py37_1 conda-forge keras-applications 1.0.7 py_1 conda-forge keras-preprocessing 1.0.9 py_1 conda-forge kiwisolver 1.1.0 py37hc9558a2_0 conda-forge krb5 1.16.3 h05b26f9_1001 conda-forge libblas 3.8.0 11_openblas conda-forge libcblas 3.8.0 11_openblas conda-forge libcurl 7.65.3 hda55be3_0 conda-forge libdap4 3.20.2 hd48c02d_1000 conda-forge libedit 3.1.20170329 hf8c457e_1001 conda-forge libffi 3.2.1 he1b5a44_1006 conda-forge libgcc-ng 9.1.0 hdf63c60_0 defaults libgdal 2.4.1 heae24aa_8 conda-forge libgfortran-ng 7.3.0 hdf63c60_0 defaults libgpuarray 0.7.6 h14c3975_1003 conda-forge libiconv 1.15 h516909a_1005 conda-forge libkml 1.3.0 h4fcabce_1010 conda-forge liblapack 3.8.0 11_openblas conda-forge libnetcdf 4.6.2 h056eaf5_1002 conda-forge libopenblas 0.3.6 h6e990d7_6 conda-forge libpng 1.6.37 hed695b0_0 conda-forge libpq 11.4 hd9ab2ff_3 conda-forge libprotobuf 3.9.1 h8b12597_0 conda-forge libsodium 1.0.17 h516909a_0 conda-forge libspatialindex 1.9.0 he1b5a44_1 conda-forge libspatialite 4.3.0a h79dc798_1030 conda-forge libssh2 1.8.2 h22169c7_2 conda-forge libstdcxx-ng 9.1.0 hdf63c60_0 defaults libtiff 4.0.10 h57b8799_1003 conda-forge libtool 2.4.6 h14c3975_1002 conda-forge libuuid 2.32.1 h14c3975_1000 conda-forge libxcb 1.13 h14c3975_1002 conda-forge libxml2 2.9.9 hee79883_2 conda-forge llvmlite 0.29.0 py37hfd453ef_1 conda-forge locket 0.2.0 py_2 conda-forge lz4 2.1.9 py37hd79334b_0 conda-forge lz4-c 1.8.3 he1b5a44_1001 conda-forge mako 1.1.0 py_0 conda-forge markdown 3.1.1 py_0 conda-forge markupsafe 1.1.1 py37h14c3975_0 conda-forge matplotlib 3.1.1 py37_1 conda-forge matplotlib-base 3.1.1 py37he7580a8_1 conda-forge mechanicalsoup 0.11.0 py_0 conda-forge mercantile 1.1.2 py_0 conda-forge metpy 0.10.2 py37_0 conda-forge mistune 0.8.4 py37h14c3975_1000 conda-forge mock 3.0.5 py37_0 conda-forge monotonic 1.5 py_0 conda-forge mpi 1.0 mpich conda-forge mpich 3.2.1 hc99cbb1_1013 conda-forge msgpack-numpy 0.4.4.3 py_0 conda-forge msgpack-python 0.6.1 py37h6bb024c_0 conda-forge multidict 4.5.2 py37h14c3975_1000 conda-forge multipledispatch 0.6.0 py_0 conda-forge munch 2.3.2 py_0 conda-forge nbconvert 5.5.0 py_0 conda-forge nbformat 4.4.0 py_1 conda-forge nbgitpuller 0.7.0 py_0 conda-forge ncurses 6.1 hf484d3e_1002 conda-forge netcdf-fortran 4.4.5 hfc18c51_1001 conda-forge netcdf4 1.5.1.2 py37h73a1b54_1 conda-forge networkx 2.3 py_0 conda-forge ninja 1.9.0 h6bb024c_0 conda-forge nodejs 11.14.0 he1b5a44_1 conda-forge notebook 6.0.0 py37_0 conda-forge numba 0.45.1 py37hb3f55d8_0 conda-forge numcodecs 0.6.3 py37hf484d3e_0 conda-forge numpy 1.17.0 py37h95a1406_0 conda-forge oauthlib 3.0.1 py_0 conda-forge olefile 0.46 py_0 conda-forge openjpeg 2.3.1 h58a6597_0 conda-forge openssl 1.1.1c h516909a_0 conda-forge owslib 0.18.0 py_0 conda-forge packaging 19.0 py_0 conda-forge pamela 1.0.0 py_0 conda-forge pandas 0.25.0 py37hb3f55d8_0 conda-forge pandoc 2.7.3 0 conda-forge pandocfilters 1.4.2 py_1 conda-forge panel 0.6.0 1 conda-forge pango 1.42.4 he7ab937_0 conda-forge param 1.9.1 py_0 conda-forge parso 0.5.1 py_0 conda-forge partd 1.0.0 py_0 conda-forge pcre 8.41 hf484d3e_1003 conda-forge pexpect 4.7.0 py37_0 conda-forge pickleshare 0.7.5 py37_1000 conda-forge pillow 6.1.0 py37h6b7be26_1 conda-forge pint 0.9 py37_2 conda-forge pip 19.2.1 py37_0 conda-forge pixman 0.38.0 h516909a_1003 conda-forge pooch 0.5.2 py37_0 conda-forge poppler 0.67.0 ha967d66_7 conda-forge poppler-data 0.4.9 1 conda-forge postgresql 11.4 hc63931a_3 conda-forge proj4 5.2.0 he1b5a44_1004 conda-forge prometheus_client 0.7.1 py_0 conda-forge prompt_toolkit 2.0.9 py_0 conda-forge protobuf 3.9.1 py37he1b5a44_0 conda-forge psutil 5.6.3 py37h516909a_0 conda-forge pthread-stubs 0.4 h14c3975_1001 conda-forge ptyprocess 0.6.0 py_1001 conda-forge pyasn1 0.4.6 py_0 conda-forge pyasn1-modules 0.2.6 py_0 conda-forge pycparser 2.19 py37_1 conda-forge pyct 0.4.6 py_0 conda-forge pyct-core 0.4.6 py_0 conda-forge pycurl 7.43.0.2 py37h16ce93b_1 conda-forge pydap 3.2.2 py37_1000 conda-forge pyepsg 0.4.0 py_0 conda-forge pygments 2.4.2 py_0 conda-forge pygpu 0.7.6 py37h3010b51_1000 conda-forge pyjwt 1.7.1 py_0 conda-forge pykdtree 1.3.1 py37h3010b51_1002 conda-forge pyke 1.1.1 py37_1000 conda-forge pyopenssl 19.0.0 py37_0 conda-forge pyorbital 1.5.0 py_0 conda-forge pyparsing 2.4.2 py_0 conda-forge pyproj 1.9.6 py37h516909a_1002 conda-forge pyqt 5.9.2 py37hcca6a23_2 conda-forge pyresample 1.12.3 py37hf2d7682_0 conda-forge pyrsistent 0.15.4 py37h516909a_0 conda-forge pyshp 2.1.0 py_0 conda-forge pysocks 1.7.0 py37_0 conda-forge pyspectral 0.8.9 py_0 conda-forge pyspharm 1.0.9 py37h6091dcd_1003 conda-forge python 3.7.3 h33d41f4_1 conda-forge python-blosc 1.8.1 py37hf484d3e_0 conda-forge python-dateutil 2.8.0 py_0 conda-forge python-editor 1.0.4 py_0 conda-forge python-geotiepoints 1.1.8 py37hd352d35_0 conda-forge python-kubernetes 10.0.0 py37_0 conda-forge python-snappy 0.5.4 py37hee44bf9_0 conda-forge pytorch-cpu 1.1.0 py37he1b5a44_0 conda-forge pytz 2019.2 py_0 conda-forge pyviz_comms 0.7.2 py_0 conda-forge pywavelets 1.0.3 py37hd352d35_1 conda-forge pyyaml 5.1.2 py37h516909a_0 conda-forge pyzmq 18.0.2 py37h1768529_2 conda-forge qt 5.9.7 h0c104cb_3 conda-forge qtconsole 4.5.2 py_0 conda-forge rasterio 1.0.24 py37hdff7cfa_0 conda-forge readline 8.0 hf8c457e_0 conda-forge regionmask 0.4.0 py_0 conda-forge requests 2.22.0 py37_1 conda-forge requests-oauthlib 1.2.0 py_0 conda-forge rio-cogeo 1.1.0 py_0 conda-forge rsa 3.4.2 py_1 conda-forge rtree 0.8.3 py37h666c49c_1002 conda-forge ruamel 1.0 py37_0 conda-forge ruamel.yaml 0.16.1 py37h516909a_0 conda-forge s3fs 0.3.3 py_0 conda-forge s3transfer 0.2.1 py37_0 conda-forge satpy 0.16.1 pyh326bf55_0 conda-forge scikit-image 0.15.0 py37hb3f55d8_2 conda-forge scikit-learn 0.21.3 py37hcdab131_0 conda-forge scipy 1.3.0 py37h921218d_1 conda-forge send2trash 1.5.0 py_0 conda-forge setuptools 41.0.1 py37_0 conda-forge shapely 1.6.4 py37hec07ddf_1006 conda-forge simpervisor 0.3 py_1 conda-forge sip 4.19.8 py37hf484d3e_1000 conda-forge six 1.12.0 py37_1000 conda-forge snappy 1.1.7 he1b5a44_1002 conda-forge snuggs 1.4.6 py_0 conda-forge sortedcontainers 2.1.0 py_0 conda-forge soupsieve 1.9.2 py37_0 conda-forge sqlalchemy 1.3.6 py37h516909a_0 conda-forge sqlite 3.29.0 hcee41ef_0 conda-forge supermercado 0.0.5 py_0 conda-forge tblib 1.4.0 py_0 conda-forge tensorboard 1.13.1 py37_0 conda-forge tensorflow 1.13.1 py37_0 conda-forge tensorflow-estimator 1.13.0 py_0 defaults termcolor 1.1.0 py_2 conda-forge terminado 0.8.2 py37_0 conda-forge testpath 0.3.1 pypi_0 pypi theano 1.0.3 py37hfc679d8_1 conda-forge tk 8.6.9 hed695b0_1002 conda-forge toolchain 2.4.0 0 defaults toolchain_c_linux-64 2.4.0 0 defaults toolchain_cxx_linux-64 2.4.0 0 defaults toolz 0.10.0 py_0 conda-forge tornado 6.0.3 py37h516909a_0 conda-forge tqdm 4.32.2 py_0 conda-forge traitlets 4.3.2 py37_1000 conda-forge traittypes 0.2.1 py_1 conda-forge trollimage 1.9.0 py_0 conda-forge trollsift 0.3.2 py_0 conda-forge tzcode 2019a h516909a_1002 conda-forge udunits2 2.2.27.6 h4e0c4b3_1001 conda-forge urllib3 1.25.3 py37_0 conda-forge wcwidth 0.1.7 py_1 conda-forge webencodings 0.5.1 py_1 conda-forge webob 1.8.5 py_0 conda-forge websocket-client 0.56.0 py37_0 conda-forge werkzeug 0.15.5 py_0 conda-forge wheel 0.33.4 py37_0 conda-forge widgetsnbextension 3.5.1 py37_0 conda-forge windspharm 1.7.0 py37_1000 conda-forge xarray 0.12.3 py_0 conda-forge xerces-c 3.2.2 h8412b87_1004 conda-forge xesmf 0.2.0 py37_0 conda-forge xgcm 0.2.0 py_0 conda-forge xorg-kbproto 1.0.7 h14c3975_1002 conda-forge xorg-libice 1.0.10 h516909a_0 conda-forge xorg-libsm 1.2.3 h84519dc_1000 conda-forge xorg-libx11 1.6.8 h516909a_0 conda-forge xorg-libxau 1.0.9 h14c3975_0 conda-forge xorg-libxdmcp 1.1.3 h516909a_0 conda-forge xorg-libxext 1.3.4 h516909a_0 conda-forge xorg-libxpm 3.5.12 h14c3975_1002 conda-forge xorg-libxrender 0.9.10 h516909a_1002 conda-forge xorg-libxt 1.1.5 h516909a_1003 conda-forge xorg-renderproto 0.11.1 h14c3975_1002 conda-forge xorg-xextproto 7.3.0 h14c3975_1002 conda-forge xorg-xproto 7.0.31 h14c3975_1007 conda-forge xrft 0.2.0 py_0 conda-forge xrviz 0.1.0+83.ge39c38a pypi_0 pypi xz 5.2.4 h14c3975_1001 conda-forge yaml 0.1.7 h14c3975_1001 conda-forge yarl 1.3.0 py37h14c3975_1000 conda-forge zarr 2.3.2 py37_0 conda-forge zeromq 4.3.2 he1b5a44_2 conda-forge zict 1.0.0 py_0 conda-forge zlib 1.2.11 h516909a_1005 conda-forge zstd 1.4.0 h3b9ef0a_0 conda-forge
andersy005 commented 5 years ago

@jhamman, this issue should be fixed once #119 is merged.

By the way, if you have a moment can I ask you to look through #119 ( I could use some feedback :))

andersy005 commented 5 years ago

Addressed in #119