a question on the use of parameters in IMP

integrativemodeling / exosome

Modeling exosome complexes from cross-link MS data

https://salilab.org/exosome

0 stars 1 forks source link

a question on the use of parameters in IMP #1

Closed wallyshi closed 8 years ago

wallyshi commented 10 years ago

rbmaxtrans = 2.00 fbmaxtrans = 2.00 rbmaxrot=0.04

Riccardo, I could not remember exactly what you explained to me about these parameters. Would you mind writing it up here if possible? Nice to take a note.

Thanks!

Pellarin commented 10 years ago

These are the maximum translations and rotations of rigid_bodies (rb) and floppy_bodies (fb, which are what we call "beads") allowed within a Monte Carlo step.