Help needed for www.pombase.org/pombemine configuration

[kimrutherford]

Hi.

I've added a ProxyPass rule for pombemine on www.pombase.org:

<Location /pombemine>
  ProxyPass http://pombemine.rahtiapp.fi/pombemine retry=10
  ProxyPassReverse http://pombemine.rahtiapp.fi/pombemine
</Location>

The initial page is retrieved correctly by the browser but the other URLs don't have the correct prefix:

So for example this:

https://www.pombase.org/js/compiled/app-fc93e4c.js

should be:

https://www.pombase.org/pombemine/js/compiled/app-fc93e4c.js

Is it possible to configure the PombeMine front end to prefix URLs with https://www.pombase.org/pombemine/ rather than https://www.pombase.org/?

If you'd like to test anything it's here: https://www.pombase.org/pombemine/

Thanks!

[danielabutano]

Hi @kimrutherford , I have tried locally using nginx listening at port 80 (with biotestmine available at http://localhost:5000/biotestmine) server { listen 80 default_server; server_name localhost; root /var/www/html;

location /biotestmine { proxy_pass http://localhost:5000/biotestmine; proxy_set_header X-Real-IP $remote_addr; proxy_set_header X-Forwarded-For $proxy_add_x_forwarded_for; proxy_set_header Host $http_host; }

location / { proxy_pass http://localhost:5000; proxy_set_header X-Real-IP $remote_addr; proxy_set_header X-Forwarded-For $proxy_add_x_forwarded_for; proxy_set_header Host $http_host; }

So I think you need also to configure the location /

[kimrutherford]

So I think you need also to configure the location /

Hi Daniela. I think that will interfere with the main pombase.org website because it will proxy everything to PombeMine. I'd like to just proxy the paths under the /pombemine because everything else is proxied to the main PomBase webapp.

I noticed that AllianceMine uses a prefix and all the resources are requested using a /alliancemine prefix. Can we do something similar for PombeMine?

[danielabutano]

yeah, you are right. @heralden do you have any suggestion?

[heralden]

Yes, the BLUEGENES_DEPLOY_PATH config var is for this (https://github.com/intermine/bluegenes/blob/dev/docs/configuring.md). Note that if you set it to /pombemine, you will get the path /pombemine/pombemine. You might want to use something else like /intermine /im etc.

[kimrutherford]

Note that if you set it to /pombemine, you will get the path /pombemine/pombemine. You might want to use something else like /intermine /im etc.

Hi. Could you explain this more? Which path will be "/pombemine/pombemine"?

[danielabutano]

I can do the configuration, but I need to redeploy ...non sure if i want to do before tomorrow presentaation.....

[heralden]

Hi. Could you explain this more? Which path will be "/pombemine/pombemine"?

Everything after www.pombase.org

[ValWood]

I agree not to upadate before the demo. It can be done for the announcement to the community.

pombemine/pombemine looks a bit weird, but I guess if that is the only option.......

[kimrutherford]

Is there a redirect from www.pombase.org/pombemine to www.pombase.org/pombemine/pombemine within the app?

[heralden]

Yes, that's right. Just to clarify, /pombemine would be the deploy path while the second /pombemine would be the name of the mine. This is because BG supports connecting to other mines.

[kimrutherford]

OK, thanks. Your suggestion of /im looks quite tidy.

[danielabutano]

Hi @heralden, i have changed the pombemine-production.yaml, adding deployPath: im But we need to change also the template deployment.yaml to add:

• name: BLUEGENES_DEPLOY_PATH value: {{ .Values.bluegenes.deployPath }}

Question: can I do locally and then run the upgrade, or I need to upload something? Thanks!

[heralden]

Yes, you're right. You can edit the template locally then run the upgrade. Once you confirmed it's working, you can commit it. Just make sure to set deployPath: /im (starting with a slash).