Regenerate genes.json - Githubissues

iobio / gene.iobio

Gene.iobio vue

MIT License

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Regenerate genes.json #965

Closed tonydisera closed 11 months ago

tonydisera commented 1 year ago

Fix bug (gene TRA) where the transcript has no features. In this case, the gene should not be included in genes.json.

AlistairNWard commented 1 year ago

Should the gene not be included or just don't run annotations? There could still be variants to view that are in ClinVar, for example

tonydisera commented 12 months ago

Regenerate genes.json in a condensed format, reducing size from ~8 MB to ~ 4 MB by using abbreviated field name (gn instead of gene_name) and using an array of values to indicate which build (GRCh37, GRCh38) and source (Gencode, Refseq) the gene is valid for.