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iobio / vcf.iobio.io

MIT License
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Incorporate the record delimiter vcfstatsalive now produces #8

Open yiq opened 9 years ago

yiq commented 9 years ago

At the end of each record vcfstatsalive produces, it now append a semicolon to indicate record-end. This is needed in case the json string is truncated during transmit, and is linked to the "100 reads sampled" bug seen in bam.iobio. However, in order to take advantage of this, which is a backword-incompatible change, modifications to vcf.iobio is necessary to break record on semicolons.

yiq commented 9 years ago

This commit on bam.iobio should provide reference on what changes need to happen

https://github.com/chmille4/bam.iobio.io/commit/f39743e11b335ae4076afbc97a7580c452ec1bf6