TreatmentBank is a service provided by the Swiss Plazi GmbH to liberate data from scholarly publications, and convert, enhance, link, store, and disseminate it as Findable, Accessible, Interoperable and Reusable (FAIR) data. These data include taxonomic treatments, treatment citations, figures, tables, material citations and bibliographic reference. The data extraction processes can be highly automated to process entire journal back-issues as well as current publications. A quality control (QC) process as well as manual checks produce data fit to become reference deposits of treatments in Biodiversity Literature Repository (BLR), as well as daily uploads of treatment articles data sets to the Global Biodiversity Information Facility (GBIF), with persistent identifiers minted in BLR. Input formats can be printed to born-digital publications. All data are openly accessible in various formats and are searchable. Currently, BLR contains more than 650,000 treatments extracted from 66,000 articles, 400,000 figures and 1,040,000 material citations.
The info to fill in for the blueprint template sheet is:
Type of data: Literature-based data
Source:TreatmentBank"Raw" data available online: Yes
Where: Accessed through the publishing journals
Data format (if known):Which group(s)?: All
Approximate size: Small size (text files).
Geographic coverage:Temporal coverage:Outputs: Articles that meet the search query (about taxonomic name, bibliographic data or materials citations) in the literature
What should be available in EMODnet Biology?:EMODnet data/product level:Task: 3.5.4
Who: Sharif Islam, Julian Lopez Gordillo (Naturalis)
Notes:
TreatmentBank
TreatmentBank is a service provided by the Swiss Plazi GmbH to liberate data from scholarly publications, and convert, enhance, link, store, and disseminate it as Findable, Accessible, Interoperable and Reusable (FAIR) data. These data include taxonomic treatments, treatment citations, figures, tables, material citations and bibliographic reference. The data extraction processes can be highly automated to process entire journal back-issues as well as current publications. A quality control (QC) process as well as manual checks produce data fit to become reference deposits of treatments in Biodiversity Literature Repository (BLR), as well as daily uploads of treatment articles data sets to the Global Biodiversity Information Facility (GBIF), with persistent identifiers minted in BLR. Input formats can be printed to born-digital publications. All data are openly accessible in various formats and are searchable. Currently, BLR contains more than 650,000 treatments extracted from 66,000 articles, 400,000 figures and 1,040,000 material citations.
This is related to https://github.com/iobis/dto-bioflow-3.5/issues/4.
The info to fill in for the blueprint template sheet is:
Type of data: Literature-based data Source: TreatmentBank "Raw" data available online: Yes Where: Accessed through the publishing journals Data format (if known): Which group(s)?: All Approximate size: Small size (text files). Geographic coverage: Temporal coverage: Outputs: Articles that meet the search query (about taxonomic name, bibliographic data or materials citations) in the literature What should be available in EMODnet Biology?: EMODnet data/product level: Task: 3.5.4 Who: Sharif Islam, Julian Lopez Gordillo (Naturalis) Notes: