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ioos / bio_data_guide

Standardizing Marine Biological Data Working Group - An open community to facilitate the mobilization of biological data to OBIS.
https://ioos.github.io/bio_data_guide/
MIT License
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[dataset]: CA Stream Health eDNA metabarcoding #175

Open kylielanglois opened 1 year ago

kylielanglois commented 1 year ago

Contact details

kyliel@sccwrp.org

Dataset Title

CA Stream Health eDNA 16S

Describe your dataset and any specific challenges or blockers you have or anticipate.

16S data currently in ASV abundance table (rows as ASV, columns as unique sample IDs) with taxonomy and sample information. Main challenge is formatting for OBIS in a way that does not overwhelm my computer or brain. Note: this data is not yet publicly available. Post workshop update: I understand the steps I need to take to format my data.

Link to "raw" Data Files.

No response

7yl4r commented 1 year ago

When will the data be made publicly available?

github-actions[bot] commented 1 year ago

Thank you for identifying this dataset for mobilization. The workshop hosts wanted to check in. Is there anything you need help with in order to mobilize this dataset to OBIS? If you would like assistance from an OBIS node you can find node contacts listed here.