Translate netCDF trajectory template to Darwin Core

[MathewBiddle]

I started a notebook in the IOOS CodeLab but I think a version of it should be in this repository.

This is a reminder for me to port/create it here.

[MathewBiddle]

xref:

• https://github.com/ioos/notebooks_demos/pull/393

[MathewBiddle]

I was able to work on this notebook during the Marine Biological Data Mobilization Workshop [1].

The notebook [2] now creates a valid Darwin Core Archive package.

The package is valid, but that doesn't mean I'm putting the right information in the right places. We'll need to hash out the details.

[1] https://ioos.github.io/bio_mobilization_workshop/

[2] https://github.com/MathewBiddle/ioos_code_lab/blob/r_nc2dwc/jupyterbook/content/code_gallery/data_management_notebooks/DRAFT-R-netCDF2DwC.ipynb

[MathewBiddle]

Resources for this effort:

• MOVE2GBIF project description: https://www.inbo.be/inbo/en-GB/projects/move2gbif-mobilizing-animal-gps-tracking-data-to-movebank-and-gbif-evinbo
• MB > DwC conversions: https://github.com/inbo/movepub (e.g., see issues and movebank_dwc_occurrence.sql)
• datasets published on GBIF with links to source datasets on Movebank: https://www.gbif.org/dataset/search?q=movebank&publishing_org=1cd669d0-80ea-11de-a9d0-f1765f95f18b

[MathewBiddle]

Our mapping spreadsheet: https://docs.google.com/spreadsheets/d/12pP4IY2oXFhkXvOePtizHnShhlmO0r7QOTxu5ETvNOA/edit#gid=0

[MathewBiddle]

Mapping is nearly done at https://github.com/MathewBiddle/ioos_code_lab/blob/r_nc2dwc/jupyterbook/content/code_gallery/data_management_notebooks/DRAFT-R-netCDF2DwC.ipynb

Just need to put it into a table.