ipb-halle / MetFamily

Understanding metabolism is fundamental in biomedical and plant research and the identification and quantification of thousands of metabolites by mass spectrometry in modern metabolomics is a prerequisite for elucidating this area. However, the identification of metabolites is a major bottleneck in traditional approaches hampering advances. Here, we present a novel approach for the untargeted discovery of metabolite families offering a bird's eye view of metabolic regulation in comparative metabolomics. We implemented the presented methodology in the easy-to-use web application MetFamily to enable the analysis of comprehensive metabolomics studies for all researchers worldwide. MetFamily is available under http://msbi.ipb-halle.de/MetFamily/.
GNU General Public License v3.0
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Started IPB corporate identity #41

Closed sneumann closed 4 years ago

sneumann commented 5 years ago

This possibly needs to be ported to the correct branch. Yours, Steffen

culpinnis commented 4 years ago

This won't be easy because a navbarpage has always a navbar on the top. This can not be changed in R shiny (AFAIK). But it is possible to attach a header & footer. The ui component of metfamily has some inconsistencies utilising the bootstrap framework (missing columns/rows) leading sometimes to strange positioning of the elements (at least if there is no white background). It could be necessary to add more row/column elements and (well)Panels to archive a consistent layout. Bildschirmfoto 2020-02-26 um 18 38 44 Bildschirmfoto 2020-02-26 um 18 38 51 Bildschirmfoto 2020-02-26 um 18 38 32 Another option could be to remove the header and to modify the navbar with a logo and IPB css properties. (e.g. like here https://stackoverflow.com/questions/24705431/how-can-i-insert-an-image-into-the-navbar-on-a-shiny-navbarpage)

culpinnis commented 4 years ago

Example without header: Bildschirmfoto 2020-02-26 um 19 35 46

culpinnis commented 4 years ago

Latest version: image

culpinnis commented 4 years ago

Final version in this PR image