iqbal-lab-org Mykrobe_tb_workflow issues - Githubissues

iqbal-lab-org / Mykrobe_tb_workflow

A workflow for analysis and resistance profiling of Mycobacterium tuberculosis nanopore data with Mykrobe

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Output report does not open _ ERROR/3 () (line 92 exceeds the line-length-limit)

#13 FlorianePoint opened 1 year ago
1
How to run several non-barcoded samples at the same time?

#12 FlorianePoint opened 1 year ago
5
Is this superceded by tbpore?

#11 iqbal-lab opened 2 years ago
1
Add subsampling to pipeline

#10 mbhall88 closed 3 years ago
0
only allow one plot job at a time

#9 mbhall88 closed 3 years ago
0
Update pipeline with new demultiplexing workflow and new software versions

#8 mbhall88 closed 3 years ago
0
Add Dockerfile

#7 mbhall88 closed 3 years ago
0
string formatting problem in reports rule

#6 mbhall88 closed 4 years ago
1
Porechop step gets killed for big fastq.gz file dataset

#5 shashibioinfo143 closed 4 years ago
16
YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated

#4 shashibioinfo143 closed 4 years ago
4
output example

#3 iqbal-lab closed 6 years ago
1
yoda reference

#2 iqbal-lab closed 6 years ago
0
Create single container

#1 mbhall88 closed 6 years ago
0