Closed bricoletc closed 4 years ago
This is probably a minor thing.
Right now when building the PRG string as input to gramtools build, chromosomes get concatenated. So a read could map across chromosome boundaries.
gramtools build
We could mark chromosome boundaries with a specific symbol, such that if we encounter it during backward search, the SearchState gets deleted.
SearchState
This is probably a minor thing.
Right now when building the PRG string as input to
gramtools build, chromosomes get concatenated. So a read could map across chromosome boundaries.We could mark chromosome boundaries with a specific symbol, such that if we encounter it during backward search, the
SearchStategets deleted.