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iqbal-lab-org / gramtools

Genome inference from a population reference graph
MIT License
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gramtools gramtools backend expected at: /home/tools/anaconda3/lib/python3.7/site-packages/gramtools/bin/gram but not found #168

Closed kdyoung100 closed 1 year ago

kdyoung100 commented 1 year ago

gramtools gramtools backend expected at: /home/tools/anaconda3/lib/python3.7/site-packages/gramtools/bin/gram but not found

i don't know...

kdyoung100 commented 1 year ago

gramtools discover usage: gramtools discover [-h] [options]

To run discovery, you need the following:

gramtools discover: error: the following arguments are required: -i/--genotype_dir, -o/--discovery_dir root@Zeta:/home/tools/anaconda3/lib/python3.7/site-packages/gramtools# gramtools -h usage: gramtools [-h] [--version] {build, genotype, discover, simulate} ...

optional arguments: -h, --help show this help message and exit --version

subcommands: {build, genotype, discover, simulate} root@Zeta:/home/tools/anaconda3/lib/python3.7/site-packages/gramtools# gramtools --version gramtools backend expected at: /home/tools/anaconda3/lib/python3.7/site-packages/gramtools/bin/gram but not found

why...?

iqbal-lab commented 1 year ago

Can you please explain in detail how you installed gramtools, and on what operating system?