search

iqbal-lab-org / gramtools

Genome inference from a population reference graph
MIT License
92 stars 15 forks source link

make[1]: *** [CMakeFiles/Makefile2:260: libgramtools/CMakeFiles/gram.dir/rule] Error 2 make: *** [Makefile:186: gram] Error 2 #169

Closed joybio closed 2 years ago

joybio commented 2 years ago

make[1]: [CMakeFiles/Makefile2:260: libgramtools/CMakeFiles/gram.dir/rule] Error 2 make: [Makefile:186: gram] Error 2

bricoletc commented 2 years ago

Hi, can you paste what commands you ran to (presumably) install gramtools?

joybio commented 2 years ago

conda create -n minos python=3.9 source activate minos pip install conan bash ./gramtools/build.sh

p.s. All dependencies in setup.cfg is ok.

bricoletc commented 2 years ago

what did pip install ./gramtools-"${VERSION}" give you? (replace VERSION) by the one you're installing)

joybio commented 2 years ago

version 1.10

bricoletc commented 2 years ago

Sorry, you're not providing me with enough info here.

joybio commented 2 years ago

Thanks. I have figured it out.