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iqbal-lab-org / gramtools

Genome inference from a population reference graph
MIT License
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Change --reference argument to --fastaq #51

Closed ffranr closed 7 years ago

ffranr commented 7 years ago

This applies to both --build and --quasimap functionality.

iqbal-lab commented 7 years ago

No - --reference in build is correct. build takes a reference fasta quasimap takes a fastq from a sample

ffranr commented 7 years ago

Bug fixed on all branches: https://github.com/iqbal-lab-org/gramtools/commit/259853d8545a3bb7cfa902cebe5c987196053291