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iqbal-lab-org / gramtools

Genome inference from a population reference graph
MIT License
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Vcf to linear prg perl fixes #79

Closed martinghunt closed 6 years ago

martinghunt commented 6 years ago

This fixes a few bugs in the script vcf_to_linear_prg.pl.

Also added in end to end tests of that script, checking PRG and VCF output is as expected. Tests are run as part of the Python test suite.