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iqbal-lab-org / gramtools

Genome inference from a population reference graph
MIT License
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Long pause prior to quasimapping #86

Closed iqbal-lab closed 6 years ago

iqbal-lab commented 6 years ago

As a test, I'm quasimapping 100,000 human reads to the 1000g-5percent PRG. I started the process one hour ago, and so far no output.

ffranr commented 6 years ago

Are you using --debug? What is the full command that you're executing?

iqbal-lab commented 6 years ago

Might as well close this - after the long pause, it crashed as documented here: https://github.com/iqbal-lab-org/gramtools/issues/87