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iqbal-lab-org
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make_prg
Code to create a PRG from a Multiple Sequence Alignment file
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Refactored clustering code and new kmeans clustering criterion
#19
bricoletc
closed
3 years ago
0
Dev
#18
bricoletc
closed
3 years ago
1
Stop producing empty alleles
#17
bricoletc
opened
4 years ago
2
add singularity image and update README
#16
mbhall88
closed
4 years ago
1
Ambiguous path production
#15
bricoletc
opened
4 years ago
55
Bugfix: erroneous clustering error raising
#14
bricoletc
closed
4 years ago
0
Refactoring and more unit tests
#13
bricoletc
closed
4 years ago
2
Incomplete ambiguous dna expansion
#12
bricoletc
closed
4 years ago
1
Viral alignments often have long runs of NNNs in...
#11
rmcolq
closed
1 year ago
3
Add fasta header to PRG file
#10
mbhall88
closed
4 years ago
1
Make output fasta formatted
#9
mbhall88
closed
4 years ago
0
Refactoring and improving test coverage
#8
mbhall88
closed
4 years ago
2
Should lowercase valid base raise error
#7
mbhall88
closed
4 years ago
3
Reorganise with setup py
#6
martinghunt
closed
4 years ago
0
Feed gramtools + Fix #4
#5
bricoletc
closed
4 years ago
2
Tests fail if compiler reorders alleles
#4
rmcolq
closed
4 years ago
0
update default max nesting level
#3
mbhall88
closed
5 years ago
0
kmer ID attribution
#2
leoisl
closed
1 year ago
6
increase default memory allocation
#1
mbhall88
closed
5 years ago
2
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