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iqbal-lab-org / pandora

Pan-genome inference and genotyping with long noisy or short accurate reads
MIT License
107 stars 14 forks source link

Investigate making pandora to compile on Mac #334

Open leoisl opened 1 year ago

leoisl commented 1 year ago

would make DrPrg accessible to more people

leoisl commented 1 year ago

Got stuck on compiling GoogleTest using clang: https://github.com/leoisl/pandora/actions/runs/5465596735/jobs/9949262677

Switching to gcc-11

mbhall88 commented 1 year ago

Looking at https://github.com/google/googletest/issues/2224 and the PR it links to, I think upgrading out google test version from v1.10 to something like from v1.13 onwards should fix this?

https://github.com/rmcolq/pandora/blob/32911655d1ccf8b8843f31fdad1f1da48a331de2/cmake/Hunter/config.cmake#L12