Closed Phelimb closed 9 years ago
{ "species": { "S.aureus": "Major" }, "susceptibility": { "Gentamicin": "S", "Penicillin": "R", "Methicillin": "R", "Trimethoprim": "S", "Erythromycin": "R", "FusidicAcid": "S", "Ciprofloxacin": "R", "Rifampicin": "S", "Tetracycline": "S", "Vancomycin": "S", "Mupirocin": "S", "Clindamycin": "R(inducible)" }, "called_variants": { "gyrA_S84L": { "R_cov": "100", "S_cov": "50" },
}, "called_genes": { "blaZ": { "cov": "74" }, "ermC": { "cov": "99" }, "mecA": { "cov": "99" }, }, "virulence_toxins": { "PVL": "negative" }
}
Is invalid.
"called_variants": { "gyrA_S84L": { "R_cov": "100", "S_cov": "50" }**,** },
The "," after gyrA_S84L should not be there in the case where there is only one called variant.
{ "species": { "S.aureus": "Major" }, "susceptibility": { "Gentamicin": "S", "Penicillin": "R", "Methicillin": "R", "Trimethoprim": "S", "Erythromycin": "R", "FusidicAcid": "S", "Ciprofloxacin": "R", "Rifampicin": "S", "Tetracycline": "S", "Vancomycin": "S", "Mupirocin": "S", "Clindamycin": "R(inducible)" }, "called_variants": { "gyrA_S84L": { "R_cov": "100", "S_cov": "50" },
}
Is invalid.
The "," after gyrA_S84L should not be there in the case where there is only one called variant.