zlib.h: No such file or directory

iqbal-lab / cortex

reference free variant assembly

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zlib.h: No such file or directory #23

Closed ShawnCone closed 5 years ago

ShawnCone commented 5 years ago

Hi,

I'm trying to install cortex by cloning the repo and bash install.sh but it gives me the error: fatal error: zlib.h: No such file or directory

I do not have root permissions, and I tried downloading zlib manually and add to LD_LIBRARY_PATH, but it still does not work. Would you please help me on this error?

Thank you

iqbal-lab commented 5 years ago

Is it possible to ask your system administrator to do something like this

sudo apt-get install libz-dev

ShawnCone commented 5 years ago

Thank you for the quick reply, I have contacted the admins of my cluster. In the meantime, would there be a possible way to do an equivalent command without root permissions?

ShawnCone commented 5 years ago

Thank you very much for the help, it worked after asking the admins to install it. Thank you!

iqbal-lab commented 5 years ago

No worries!