taxonomy.rdf is too long to stop at ET.parse('taxonomy.rdf').getroot()'

iquasere / reCOGnizer

A tool for domain based annotation with databases from the Conserved Domains Database

BSD 3-Clause "New" or "Revised" License

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taxonomy.rdf is too long to stop at ET.parse('taxonomy.rdf').getroot()' #18

Open qiuqingpo opened 3 months ago

qiuqingpo commented 3 months ago

1723023181(1) hello iquasre! it was stop on ' root = ET.parse('taxonomy.rdf').getroot()', i find the file of 'taxonomy.rdf' is too big ,it total length is 1.2g my command is -f inputfile.fasta -o output_directory

iquasere commented 2 months ago

Hey there!

How much memory do you have available in your system?