Open schristley opened 3 years ago
One thing to consider is if we need separate apps for rearrangement vs clone statistics? The calculations have some overlap but there might be additional stats for clones.
Removed the biochemical properties from statistics app as that generates annotations for each rearrangement, with a corresponding AIRR TSV. We need to think how/what we want to provide for biochemical properties, and they should probably be calculated during initial sequence annotation, i.e. IgBlast.
The statistics app now generates all of the rearrangement statistics for the stats API
@schristley I am cleaning up Milestones, can we mark this as closed or move it to another milestone.
This app will compute a set of basic statistics. It should at least cover all of the statistics provided by the Stats API.
Basic analyses:
Diversity:
CDR3 analyses: