smrgeoinfo
commented
2 weeks ago use search and replace in files for these repositories in isamplesorg organization: /metadata /metadata_profile_archaeology /metadata_profile_biology /metadata_profile_earth_science /vocabularies.
text replacements: has_specimen_category --> has_sample_object_type Physical specimen --> Material sample specimentype --> sampleobjecttype earthenv_specimen_type --> earthenv_sample_object_type solidmaterialspecimen --> solidmaterialsample 1.0/physicalspecimen --> 1.0/materialsample hasSpecimenCategory --> has_sample_object_type Any biological specimen --> Biological material sample /biologicalspecimen --> /biologicalmaterialsample /mineralspecimen --> /mineralmaterialsample Whole organism specimen -- Whole organism material sample SpecimenCurationEvent --> MaterialSampleCurationEvent specimen samples --> material sample represents /SpecimenCuration --> /MaterialSampleCuration
in isamples_core.yaml and iSamplesSchemaCore1.0.json PhysicalSampleRecord --> MaterialSampleRecord physical sample --> material sample SpecimenCuration --> MaterialSampleCuration
Currently have trail of different language to talk about samples-- physical specimen, specimen, material specimen, physical sample, material sample... Make consistent in vocabs and metadata with 'material sample'. This is consistent with Darwin Core TDWG wg decision (https://dwc.tdwg.org/list/#dwc_MaterialSample) and current OGC O&M/ISO19156 (http://www.opengis.net/doc/as/om/3.0).