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InSAR Scientific Computing Environment version 2
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run_20 ion issue even with no pairs in pairs_diff_starting_ranges.txt #551

Open jaha2600 opened 2 years ago

jaha2600 commented 2 years ago

I am currently trying to run the ionospheric correction module on some Sentinel-1 images over Greenland. There are no files in pairs_diff_starting_ranges.txt so I do not remove any files from processing.

I have completed the #500 update to account for the incorrect indentation, but this did not result in any changes in the output error, this may also link to #511

Below are my s1_select_ion.py and stackSentinel.py commands (i am using the default ion_param.txt file). s1_select_ion.py -dir ./slc -sn 67.122314/69.035088 -nr 10

stackSentinel.py -s slc/ -d dem/glo_30.dem.wgs84 -a aux_dir/ -o orbits/ -b '67.122314 69.035088 -54.830711 -48.040665' -c 4 -p hh --param_ion ./ion_param.txt --num_connections_ion 3 --num_proc4topo 10. From run_20 onwards I get failures and missing files in all subsequent stages. This results in run_24 failing completely. It is unclear to me where all the failures are coming from given the empty pairs_diff_starting_ranges.txt file. Below is the run_20 error. I have also attached the full run_19, run_20 and run_24 output files and can provide more if required.

Any help would be greatly appreciated.

Running: unwrap ['--ifg', '/gpfs/summit/scratch/jaha2600/GREENLAND/2022/stack_mintpy/kanger_25_365/ion/20180730_20190526/lower/merged/fine.int', '--unw', '/gpfs/summit/scratch/jaha2600/GREENLAND/2022/stack_mintpy/kanger_25_365/ion/20180730_20190526/lower/merged/fine.unw', '--coh', '/gpfs/summit/scratch/jaha2600/GREENLAND/2022/stack_mintpy/kanger_25_365/ion/20180730_20190526/lower/merged/fine.cor', '--reference', '/gpfs/summit/scratch/jaha2600/GREENLAND/2022/stack_mintpy/kanger_25_365/reference', '--defomax', '2', '--rlks', '40', '--alks', '10', '--method', 'snaphu'] This is the Open Source version of ISCE. Some of the workflows depend on a separate licensed package. To obtain the licensed package, please make a request for ISCE through the website: https://download.jpl.nasa.gov/ops/request/index.cfm. Alternatively, if you are a member, or can become a member of WinSAR you may be able to obtain access to a version of the licensed sofware at https://winsar.unavco.org/software/isce unwrapping method : snaphu Traceback (most recent call last): File "/projects/jaha2600/software/anaconda/isce2_summit/contrib/stack/topsStack/SentinelWrapper.py", line 251, in main(args.start,args.end) File "/projects/jaha2600/software/anaconda/isce2_summit/contrib/stack/topsStack/SentinelWrapper.py", line 242, in main cfgParser.runCmd() File "/projects/jaha2600/software/anaconda/isce2_summit/contrib/stack/topsStack/SentinelWrapper.py", line 54, in runCmd func_modules.main(self.funcParams[section]) File "/projects/jaha2600/software/anaconda/isce2_summit/contrib/stack/topsStack/unwrap.py", line 328, in main fncall(inps.intfile, inps.unwfile, inps.cohfile, metadata, defomax=inps.defomax) File "/projects/jaha2600/software/anaconda/isce2_summit/contrib/stack/topsStack/unwrap.py", line 237, in runUnwrapMcf runUnwrap(infile, outfile, corfile, config, costMode = 'SMOOTH',initMethod = 'MCF', defomax = defomax, initOnly = True) File "/projects/jaha2600/software/anaconda/isce2_summit/contrib/stack/topsStack/unwrap.py", line 170, in runUnwrap img.load(infile + '.xml') File "/projects/jaha2600/software/anaconda/isce2_summit/local/packages/isce/components/iscesys/Component/Configurable.py", line 1407, in load tmpProp, tmpFact, tmpMisc = FP.parse(filename) File "/projects/jaha2600/software/anaconda/isce2_summit/local/packages/isce/components/iscesys/Parsers/XmlParser.py", line 41, in parse root = ET.parse(filename) File "/projects/jaha2600/software/anaconda/envs/isce2/lib/python3.9/xml/etree/ElementTree.py", line 1229, in parse tree.parse(source, parser) File "/projects/jaha2600/software/anaconda/envs/isce2/lib/python3.9/xml/etree/ElementTree.py", line 569, in parse source = open(source, "rb") FileNotFoundError: [Errno 2] No such file or directory: '/gpfs/summit/scratch/jaha2600/GREENLAND/2022/stack_mintpy/kanger_25_365/ion/20180730_20190526/lower/merged/fine.int.xml'

run_19_mergeBurstsIon_output_11164689.txt run_20_unwrap_ion_output_11164690.txt run_24_invertIon_output_11164694.txt

jaha2600 commented 2 years ago

I have reopened this because these errors did not actually get fixed (accidental closure on my part) I have ensured that the bounds are appropriate for use with the ion run, and have run s1_select_ion.py multiple times.