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ismms-himc / clustergrammer2

"Dimensionality-increasing" data visualization tool and interactive WebGL Jupyter widget built for single-cell data.
https://clustergrammer.readthedocs.io/case_studies.html
MIT License
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Location-Based Data Viewer Example #28

Closed cornhundred closed 4 years ago

cornhundred commented 5 years ago

Link Voronoi diagram from codex. Calculate nearest neighbor cell type breakdown. Make heatmap of nearest neighbor breakdown and combine with marker levels.

Look into Kepler.gl widget for Voronoi plots.

cornhundred commented 4 years ago

This example has been made here: https://github.com/ismms-himc/codex_dashboard

We need to improve the Voronoi plotting and make it in WebGL to be able to handle more cells and zooming.